RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SCUBE1Q8IWY4 988 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 SPC24Q8NBT2 197 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 SLCO2A1Q92959 643 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 VMP1Q96GC9 406 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 SMIM10Q96HG1 83 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 FOXC2Q99958 501 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 GPATCH1Q9BRR8 931 aaKnown RBP14.39□□□□□ -0.11
PALB2-205ENST00000567003 TTTY12Q9BZ98 90 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 ZDHHC11Q9H8X9 412 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 ZNF358Q9NW07 568 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 HPF1Q9NWY4 346 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 Q9UFV3 132 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 PLEKHA6Q9Y2H5 1048 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 CLDN16Q9Y5I7 305 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 FAM215AQ9Y5M1 114 aa14.39□□□□□ -0.11
PALB2-205ENST00000567003 MAGEB16A2A368 324 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 WWP2O00308 870 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 CELA3AP09093 270 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 HIST1H2AGP0C0S8 130 aaPredicted RBP14.38□□□□□ -0.11
PALB2-205ENST00000567003 MLNP12872 115 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 HIST1H2ADP20671 130 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 AHRP35869 848 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 SOX3P41225 446 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 GPR143P51810 404 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 BTN3A2P78410 334 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 FOLH1Q04609 750 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 RUNX2Q13950 521 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 CSHL1Q14406 222 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 ZNF750Q32MQ0 723 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 ARMC3Q5W041 872 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 KIAA0408Q6ZU52 694 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 STRA8Q7Z7C7 330 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 CLNKQ7Z7G1 428 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 TMPRSS11BQ86T26 416 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 CLYBLQ8N0X4 340 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 TBC1D19Q8N5T2 526 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 C2CD4AQ8NCU7 369 aaPredicted RBP14.38□□□□□ -0.11
PALB2-205ENST00000567003 CALML6Q8TD86 181 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 CREB3L4Q8TEY5 395 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 MAIP1Q8WWC4 291 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 ASB15Q8WXK1 588 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 FBXL8Q96CD0 374 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 HIST1H2AHQ96KK5 128 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 SIGLEC10Q96LC7 697 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 HIST1H2AJQ99878 128 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 TTYH2Q9BSA4 534 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 FAM167BQ9BTA0 163 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 H2AFJQ9BTM1 129 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 POLDIP3Q9BY77 421 aaKnown RBP14.38□□□□□ -0.11
PALB2-205ENST00000567003 XAB2Q9HCS7 855 aaKnown RBP14.38□□□□□ -0.11
PALB2-205ENST00000567003 TAS2R13Q9NYV9 303 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 ST6GALNAC2Q9UJ37 374 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 YARS2Q9Y2Z4 477 aaKnown RBP14.38□□□□□ -0.11
PALB2-205ENST00000567003 MMACHCQ9Y4U1 282 aa14.38□□□□□ -0.11
PALB2-205ENST00000567003 BANF1O75531 89 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 CTAG2O75638 210 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 GLSO94925 669 aaPredicted RBP14.37□□□□□ -0.11
PALB2-205ENST00000567003 MAGEA3P43357 314 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 MAGEA5P43359 124 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 PPP2R2AP63151 447 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 HECTD2Q5U5R9 776 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 NIPAL1Q6NVV3 410 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 PAOXQ6QHF9 649 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 B3GNT6Q6ZMB0 384 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 LMNTD2Q8IXW0 634 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 TMEM251Q8N6I4 163 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 ZNF321PQ8N8H1 164 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 FAM47BQ8NA70 645 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
PALB2-205ENST00000567003 CHDHQ8NE62 594 aaPredicted RBP14.37□□□□□ -0.11
PALB2-205ENST00000567003 MCUQ8NE86 351 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 CCDC77Q9BR77 488 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 CNPPD1Q9BV87 410 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 PRTFDC1Q9NRG1 225 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 DYRK1BQ9Y463 629 aa14.37□□□□□ -0.11
PALB2-205ENST00000567003 FAM221AA4D161 298 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 PABPN1LA6NDY0 278 aaKnown RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 ACOT7O00154 380 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 NRDCO43847 1150 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 ZNF354AO60765 605 aaPredicted RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 ZFAND5O76080 213 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 SAT1P21673 171 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 HNRNPH1P31943 449 aaKnown RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 ZFP36L2P47974 494 aaKnown RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 DNASE1L1P49184 302 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 CCZ1BP86790 482 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 CCZ1P86791 482 aaPredicted RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 CRYMQ14894 314 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 TERF2Q15554 542 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 NXPE4Q6UWF7 544 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 ARSKQ6UWY0 536 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 TRILQ7L0X0 811 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 WDR53Q7Z5U6 358 aaPredicted RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 SLC22A16Q86VW1 577 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 THOC6Q86W42 341 aaKnown RBP14.36□□□□□ -0.11
PALB2-205ENST00000567003 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.36□□□□□ -0.11
PALB2-205ENST00000567003 RASL10BQ96S79 203 aa14.36□□□□□ -0.11
PALB2-205ENST00000567003 CSF3RQ99062 836 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms