RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TGFB1P01137 390 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 FHP07954 510 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 CPA3P15088 417 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF10P21506 573 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 JAK1P23458 1154 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 CASRP41180 1078 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 EFNA3P52797 238 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 PLA2G16P53816 162 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 OLR1P78380 273 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 GGTA1PQ4G0N0 100 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 TNFAIP8L3Q5GJ75 292 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 TRIM40Q6P9F5 258 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 ABHD17CQ6PCB6 329 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 UBE3DQ7Z6J8 389 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 CCDC63Q8NA47 563 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 OR2L5Q8NG80 312 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 REPS1Q96D71 796 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 CMTM7Q96FZ5 175 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 NPLQ9BXD5 320 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 LHPPQ9H008 270 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 IQCGQ9H095 443 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 GSTO2Q9H4Y5 243 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF160Q9HCG1 818 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 LANCL2Q9NS86 450 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 SLC17A7Q9P2U7 560 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 MID2Q9UJV3 735 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF225Q9UK10 706 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 CPAMD8Q8IZJ3 1885 aa13.03□□□□□ -0.32
HERPUD1-210ENST00000565966 NBASA2RRP1 2371 aa13.02□□□□□ -0.32
HERPUD1-210ENST00000565966 OR2W5A6NFC9 320 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 SH3BGRLO75368 114 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 CDC123O75794 336 aaPredicted RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 OR4F21O95013 312 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 RNH1P13489 461 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 ICAM2P13598 275 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 NEK2P51955 445 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 DNAJB13P59910 316 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 RHAGQ02094 409 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 EEF1A2Q05639 463 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 TGM3Q08188 693 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 Q0VFX4 171 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 RUNX2Q13950 521 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 PCOLCEQ15113 449 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 DEPDC1Q5TB30 811 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 KHDRBS2Q5VWX1 349 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 LETMD1Q6P1Q0 360 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 IGFL3Q6UXB1 125 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 CHSY3Q70JA7 882 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 CPEB2Q7Z5Q1 589 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 CROCCP2Q86T23 111 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 KBTBD2Q8IY47 623 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 CA13Q8N1Q1 262 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 CCNYL1Q8N7R7 359 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 SRFBP1Q8NEF9 429 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 FAM111AQ96PZ2 611 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 ZNF382Q96SR6 550 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 TUBB6Q9BUF5 446 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 ZNF700Q9H0M5 742 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 OR51B5Q9H339 312 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 DMRT3Q9NQL9 472 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 PRDM7Q9NQW5 492 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 OXSMQ9NWU1 459 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 SENP1Q9P0U3 644 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 TRPS1Q9UHF7 1281 aa13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 HELZ2Q9BYK8 2649 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-210ENST00000565966 MAGEB17A8MXT2 336 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 PSMD12O00232 456 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 FOXE1O00358 373 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 B3GALT2O43825 422 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 TYROBPO43914 113 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 B4GALT2O60909 372 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 MLYCDO95822 493 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 SERPINA7P05543 415 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 NAGLUP54802 743 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 RPS13P62277 151 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 AP2B1P63010 937 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 PHEXP78562 749 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 PCLAFQ15004 111 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 NSDHLQ15738 373 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 FAM219BQ5XKK7 198 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 FRG2Q64ET8 278 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 TTC19Q6DKK2 380 aaPredicted RBP13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 ZNF793Q6ZN11 406 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 RIPOR1Q6ZS17 1223 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
HERPUD1-210ENST00000565966 GPRIN3Q6ZVF9 776 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms