RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 KRT78Q8N1N4 520 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 SNX31Q8N9S9 440 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 NOA1Q8NC60 698 aaKnown RBP17.32■□□□□ 0.36
CLN6-204ENST00000564752 TTLQ8NG68 377 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 STAG3L4Q8TBR4 150 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 SMIM10Q96HG1 83 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 ALG9Q9H6U8 611 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 RUBCNLQ9H714 662 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 NMRAL1Q9HBL8 299 aa17.32■□□□□ 0.36
CLN6-204ENST00000564752 SUPT3HB4E1H0 165 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 NPIPA5E9PKD4 350 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 FAM227AF5H4B4 570 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 SUPT3HO75486 399 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 STK16O75716 305 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 SERPINA6P08185 405 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 LTA4HP09960 611 aaKnown RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 GSTM2P28161 218 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 HTR1EP28566 365 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 STXBP1P61764 594 aaKnown RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 BMPR2Q13873 1038 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 NAA30Q147X3 362 aaPredicted RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 PDK4Q16654 411 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 ZNF630Q2M218 657 aaPredicted RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 ZNF468Q5VIY5 522 aaPredicted RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 XKRXQ6PP77 449 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 TMIGD1Q6UXZ0 262 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 Q6ZPB1 254 aaPredicted RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 GALNTL5Q7Z4T8 443 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 SPPL2CQ8IUH8 684 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 KIF2BQ8N4N8 673 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 CCT6BQ92526 530 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 ESAMQ96AP7 390 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 FRMD6Q96NE9 622 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 TSPYL1Q9H0U9 437 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 KLHL31Q9H511 634 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 CHST11Q9NPF2 352 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 NINJ2Q9NZG7 142 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 NUDT4Q9NZJ9 180 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 LRFN1Q9P244 771 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
CLN6-204ENST00000564752 NPIPA1Q9UND3 350 aa17.31■□□□□ 0.36
CLN6-204ENST00000564752 FBN2P35556 2912 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 IGKV3D-11A0A0A0MRZ8 115 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 TCRBV16S1A1N1A0A5B0 115 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 CCNT2O60583 730 aaKnown RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 ADORA2A-AS1P86434 159 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 DLG1Q12959 904 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 MROH9Q5TGP6 573 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 LRRC70Q7Z2Q7 622 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 CCDC91Q7Z6B0 441 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 CYP4X1Q8N118 509 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 FAM98AQ8NCA5 519 aaKnown RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 NFAM1Q8NET5 270 aaPredicted RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 ADAMTS18Q8TE60 1221 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 CREB3L4Q8TEY5 395 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 IFT81Q8WYA0 676 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 GAL3ST3Q96A11 431 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 MAGED4Q96JG8 741 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 PHF12Q96QT6 1004 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 FMO2Q99518 471 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 PITHD1Q9GZP4 211 aaPredicted RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 TSPAN10Q9H1Z9 355 aaPredicted RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 EHD1Q9H4M9 534 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 ACSS3Q9H6R3 686 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 TRIM45Q9H8W5 580 aaPredicted RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 TINAGQ9UJW2 476 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 PTBP2Q9UKA9 531 aaKnown RBP17.3■□□□□ 0.36
CLN6-204ENST00000564752 ACOT9Q9Y305 439 aa17.3■□□□□ 0.36
CLN6-204ENST00000564752 A0A087X1B8 175 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 SAGE2PA6NJ88 616 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 PSMD12O00232 456 aaPredicted RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 ASNA1O43681 348 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 KERAO60938 352 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 SLC25A12O75746 678 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 ESRRAP11474 423 aaPredicted RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 RNH1P13489 461 aaKnown RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 AGAP20933 346 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 MAOAP21397 527 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 ELAVL4P26378 380 aaKnown RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 TPP2P29144 1249 aaPredicted RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 MLF1P58340 268 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 GLE1Q53GS7 698 aaKnown RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 XKR6Q5GH73 641 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 ISCA2Q86U28 154 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 RELL1Q8IUW5 271 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 PTCD3Q96EY7 689 aaKnown RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 SEC16BQ96JE7 1060 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 ATOH8Q96SQ7 321 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 AICDAQ9GZX7 198 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 CDC42EP4Q9H3Q1 356 aaKnown RBP17.29■□□□□ 0.36
CLN6-204ENST00000564752 NT5DC2Q9H857 520 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 NECTIN3Q9NQS3 549 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 PRDM9Q9NQV7 894 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 SNX15Q9NRS6 342 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 IGSF5Q9NSI5 407 aa17.29■□□□□ 0.36
CLN6-204ENST00000564752 ANKDD1BA6NHY2 528 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 C4orf51C9J302 202 aa17.28■□□□□ 0.36
CLN6-204ENST00000564752 UBXN8O00124 270 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms