RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PPIL6Q8IXY8 311 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 MCUQ8NE86 351 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 OR1N1Q8NGS0 311 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 OR9A4Q8NGU2 314 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 HMGCLL1Q8TB92 370 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 CD200R1Q8TD46 325 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 CALML6Q8TD86 181 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 BRIX1Q8TDN6 353 aaKnown RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 GRHL3Q8TE85 626 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 UBE2Q2Q8WVN8 375 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 CAPZA3Q96KX2 299 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 C5orf34Q96MH7 638 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 ZNF285Q96NJ3 590 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 OSBPL9Q96SU4 736 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 NAP1L3Q99457 506 aaPredicted RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 FAM167BQ9BTA0 163 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 DRC3Q9H069 523 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 SLC26A1Q9H2B4 701 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 SEC61A2Q9H9S3 476 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 BARX1Q9HBU1 254 aaPredicted RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 CCDC177Q9NQR7 707 aaPredicted RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 AGPAT4Q9NRZ5 378 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 HCN3Q9P1Z3 774 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 ERRFI1Q9UJM3 462 aaPredicted RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 CDC14AQ9UNH5 594 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 SH2B3Q9UQQ2 575 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 OSGIN2Q9Y236 505 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 MRPS2Q9Y399 296 aaKnown RBP6.94□□□□□ -1.3
SPG11-213ENST00000558988 COMMD10Q9Y6G5 202 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 CNTRLQ7Z7A1 2325 aa6.94□□□□□ -1.3
SPG11-213ENST00000558988 SVILO95425 2214 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 SCN3AQ9NY46 2000 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 HEATR5BQ9P2D3 2071 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 SPTBN1Q01082 2364 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 MAGEB16A2A368 324 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 DYTNA2CJ06 578 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 OR2W5A6NFC9 320 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ZNF860A6NHJ4 632 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 VSTM2BA6NLU5 285 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 E7ENX8 843 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 CDC123O75794 336 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 SEC24DO94855 1032 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 CBX6O95503 412 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 SERPIND1P05546 499 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 PRR35P0CG20 571 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 MPC1LP0DKB6 136 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ERGP11308 486 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 COX6A1P12074 109 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 CDH1P12830 882 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 MLNP12872 115 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ENO3P13929 434 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 EZRP15311 586 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 PGAM1P18669 254 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 IMPA1P29218 277 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 HSD17B2P37059 387 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 MAGEA6P43360 314 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 AVPR1BP47901 424 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ADARP55265 1226 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 MEF2AQ02078 507 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 TAP2Q03519 686 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ZNF33BQ06732 778 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 PTK6Q13882 451 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 CRYMQ14894 314 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ZNF169Q14929 603 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 ARHGAP19Q14CB8 494 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 NDUFA9Q16795 377 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 B3GNTL1Q67FW5 361 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 FAM180AQ6UWF9 173 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 IGFL3Q6UXB1 125 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ZNF662Q6ZS27 426 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 ZC3H7AQ8IWR0 971 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 KLHL7Q8IXQ5 586 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 MYO1HQ8N1T3 1032 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 RASGEF1CQ8N431 466 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 AMER3Q8N944 861 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 MCOLN3Q8TDD5 553 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 PPP4R1Q8TF05 950 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 GRK7Q8WTQ7 553 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 EEF1AKMT1Q8WVE0 214 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 KCNJ9Q92806 393 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 LINGO1Q96FE5 620 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 OR2A5Q96R48 311 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 TRIM31Q9BZY9 425 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 DDX47Q9H0S4 455 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 GP6Q9HCN6 339 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 C14orf105Q9NVL8 296 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 SH3BGRL2Q9UJC5 107 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 CHMP2BQ9UQN3 213 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 MED16Q9Y2X0 877 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 DHRS7Q9Y394 339 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 SF3B6Q9Y3B4 125 aaKnown RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 NAV2Q8IVL1 2488 aa6.93□□□□□ -1.3
SPG11-213ENST00000558988 UBR5O95071 2799 aaPredicted RBP6.93□□□□□ -1.3
SPG11-213ENST00000558988 LRRK2Q5S007 2527 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 A8MUI8 341 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 SGK494L7N484 410 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 RDH16O75452 317 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 GUCA1CO95843 209 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms