RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LRRC70Q7Z2Q7 622 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 UBE3DQ7Z6J8 389 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 MNS1Q8NEH6 495 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 SUN3Q8TAQ9 357 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 SCYL1Q96KG9 808 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 ZNF354BQ96LW1 612 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 TSPAN10Q9H1Z9 355 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-208ENST00000558827 OR51B5Q9H339 312 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 NT5DC2Q9H857 520 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 COPS7BQ9H9Q2 264 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-208ENST00000558827 MMP25Q9NPA2 562 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 PRDM9Q9NQV7 894 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 OLAHQ9NV23 265 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 TEKT2Q9UIF3 430 aa11.73□□□□□ -0.53
SMAD3-208ENST00000558827 A0A087X1B8 175 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 GABRR3A8MPY1 467 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 PRAMEF2O60811 474 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 MYO1DO94832 1006 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ALDOAP04075 364 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 INHBAP08476 426 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ECHS1P30084 290 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 SERPINB8P50452 374 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ILF2Q12905 390 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 TUBA3CQ13748 450 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 OR1C1Q15619 314 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 MEP1AQ16819 746 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 FAM83EQ2M2I3 478 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ZNF766Q5HY98 468 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 CDKL4Q5MAI5 379 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 TRIM40Q6P9F5 258 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ABHD17CQ6PCB6 329 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 TUBA3EQ6PEY2 450 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ZNF793Q6ZN11 406 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 QSOX2Q6ZRP7 698 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 RPS19BP1Q86WX3 136 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 BCORP1Q8N888 145 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 TTLQ8NG68 377 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 OR2L5Q8NG80 312 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ZNF473Q8WTR7 871 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 MTFMTQ96DP5 389 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 PHF21BQ96EK2 531 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 GPR78Q96P69 363 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 FMO2Q99518 471 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 BARD1Q99728 777 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 MAPKAP1Q9BPZ7 522 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 UTP23Q9BRU9 249 aaKnown RBP11.72□□□□□ -0.53
SMAD3-208ENST00000558827 EFCAB11Q9BUY7 163 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 ACSS3Q9H6R3 686 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 PRDM7Q9NQW5 492 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 FBXW2Q9UKT8 454 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 NFU1Q9UMS0 254 aa11.72□□□□□ -0.53
SMAD3-208ENST00000558827 TRBV11-1A0A0K0K1C0 115 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 TCRBV16S1A1N1A0A5B0 115 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 SAGE2PA6NJ88 616 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 LRRTM2O43300 516 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 KLHL2O95198 593 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 RASAL1O95294 804 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 IFNA16P05015 189 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 GP1BBP13224 206 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 EPB42P16452 691 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 ARL1P40616 181 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-208ENST00000558827 MTTPP55157 894 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 LIM2P55344 173 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 RAB38P57729 211 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 TAS2R50P59544 299 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 AP2B1P63010 937 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 LAPTM5Q13571 262 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 PAGE2BQ5JRK9 111 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 C1QL3Q5VWW1 255 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 NIPAL1Q6NVV3 410 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 H3F3CQ6NXT2 135 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 MED27Q6P2C8 311 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 RPS27LQ71UM5 84 aaKnown RBP11.71□□□□□ -0.53
SMAD3-208ENST00000558827 OR4N5Q8IXE1 308 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 PTGR2Q8N8N7 351 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-208ENST00000558827 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 NFAM1Q8NET5 270 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-208ENST00000558827 OR7G3Q8NG95 312 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 ELP5Q8TE02 316 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 SLC44A1Q8WWI5 657 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 WDR34Q96EX3 536 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 CDK15Q96Q40 435 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 SERINC2Q96SA4 455 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 PAFAH2Q99487 392 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.53
SMAD3-208ENST00000558827 MS4A8Q9BY19 250 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 DEFB126Q9BYW3 111 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 EHD1Q9H4M9 534 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 PLEKHB1Q9UF11 243 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-208ENST00000558827 SH3BGRL2Q9UJC5 107 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 SLC5A6Q9Y289 635 aa11.71□□□□□ -0.53
SMAD3-208ENST00000558827 PCNX1Q96RV3 2341 aa11.7□□□□□ -0.54
SMAD3-208ENST00000558827 IGKV3D-11A0A0A0MRZ8 115 aa11.7□□□□□ -0.54
SMAD3-208ENST00000558827 ARHGAP10A1A4S6 786 aa11.7□□□□□ -0.54
SMAD3-208ENST00000558827 WASHC1A8K0Z3 465 aa11.7□□□□□ -0.54
SMAD3-208ENST00000558827 TRIM49D1C9J1S8 452 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms