RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MEOX2P50222 304 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ATP4BP51164 291 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 DCAF7P61962 342 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MRPS22P82650 360 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SEMG2Q02383 582 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CD300CQ08708 224 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 HDDC2Q7Z4H3 204 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 GPR149Q86SP6 731 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PDSS2Q86YH6 399 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CADM2Q8N3J6 435 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ATG16L2Q8NAA4 619 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SLC24A4Q8NFF2 622 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 BPIFCQ8NFQ6 507 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ST7LQ8TDW4 575 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MRPS31Q92665 395 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 DLG3Q92796 817 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ADIPOR1Q96A54 375 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 TCEAL4Q96EI5 215 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 OR1F2PQ96R84 312 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 LYSMD1Q96S90 227 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ECSITQ9BQ95 431 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 GPR63Q9BZJ6 419 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 KLHL31Q9H511 634 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ZFYVE1Q9HBF4 777 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SDR39U1Q9NRG7 319 aaPredicted RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PNO1Q9NRX1 252 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ZDHHC7Q9NXF8 308 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MAP10Q9P2G4 905 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 GMPR2Q9P2T1 348 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 BCAP29Q9UHQ4 241 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 RIMS3Q9UJD0 308 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 HS3ST2Q9Y278 367 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 DHRS7Q9Y394 339 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PKP3Q9Y446 797 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 HCFC2Q9Y5Z7 792 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 KCNE2Q9Y6J6 123 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MYO15AQ9UKN7 3530 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MUC22E2RYF6 1773 aaPredicted RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 COL4A3Q01955 1670 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 C9JVG2 144 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 RGS13O14921 159 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CFLARO15519 480 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 BCAS1O75363 584 aaPredicted RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CCNB2O95067 398 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 DIRAS3O95661 229 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 IL1AP01583 271 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SNRPB2P08579 225 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 POU2F2P09086 479 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 LINC00032P0C843 101 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ACADMP11310 421 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ACRV1P26436 265 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 DIO3P55073 304 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 AQP4P55087 323 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 IL2P60568 153 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MPPE1Q53F39 396 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 RARS2Q5T160 578 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 STEAP3Q658P3 488 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF813Q6ZN06 617 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SERPINA9Q86WD7 417 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PLD3Q8IV08 490 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PCYOX1LQ8NBM8 494 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 BHLHE22Q8NFJ8 381 aaPredicted RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 OR2AP1Q8NGE2 309 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SLC5A11Q8WWX8 675 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 MAFIPQ8WZ33 124 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 AP2M1Q96CW1 435 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PDLIM5Q96HC4 596 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PLEKHA8Q96JA3 519 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CDK15Q96Q40 435 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CIPCQ9C0C6 399 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 SLC35D1Q9NTN3 355 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 THG1LQ9NWX6 298 aaKnown RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 NPFFR2Q9Y5X5 522 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 IRAK3Q9Y616 596 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PRSS51A0A1B0GVH4 220 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ASPDHA6ND91 283 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CCL16O15467 120 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 NRP2O60462 931 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RFPL2O75678 378 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 HSD3B1P14060 373 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 UGT1A6P19224 532 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 UGT1A1P22309 533 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 UGT1A4P22310 534 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ME2P23368 584 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RPS3P23396 243 aaKnown RBP eCLIP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 UGT1A3P35503 534 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 UGT1A5P35504 534 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 P2RY4P51582 365 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DGKQP52824 942 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 AP1S2P56377 157 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RPL26P61254 145 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PSME3P61289 254 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GALK2Q01415 458 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 BCL2L1Q07817 233 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SYT16Q17RD7 645 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM44Q2T9K0 475 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 OGFRL1Q5TC84 451 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 YOD1Q5VVQ6 348 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM215Q68D42 235 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms