RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CYP11B2P19099 503 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 LMO2P25791 158 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 EEF1DP29692 281 aaKnown RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 CTNNA1P35221 906 aaKnown RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 NDUFV3P56181 108 aaKnown RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 DLK1P80370 383 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 RBBP7Q16576 425 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 C9orf152Q5JTZ5 239 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 TMUB2Q71RG4 321 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 TLK2Q86UE8 772 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 VSIG1Q86XK7 387 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 C4orf32Q8N8J7 132 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 POGLUT1Q8NBL1 392 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 OR9Q2Q8NGE9 314 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 CASP10Q92851 521 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 RFT1Q96AA3 541 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PI4K2AQ9BTU6 479 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 RSPH9Q9H1X1 276 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-210ENST00000553693 RABEP2Q9H5N1 569 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 DNAJC4Q9NNZ3 241 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PFDN4Q9NQP4 134 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 PILRBQ9UKJ0 227 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 VSIG4Q9Y279 399 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 CAMTA1Q9Y6Y1 1673 aa3.03□□□□□ -1.92
SCFD1-210ENST00000553693 DISP2A7MBM2 1401 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 CROCC2H7BZ55 1655 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 A0A0U1RQG5 324 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-210ENST00000553693 C17orf105B2RV13 164 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 F8VVB4 439 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 F8VWA3 439 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 PSMA7O14818 248 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 SAP30O75446 220 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 SERPING1P05155 500 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 CAPZA2P47755 286 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 BECN1Q14457 450 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 PTGISQ16647 500 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 DUSP5Q16690 384 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 AGAP7PQ5VUJ5 663 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 ARMC3Q5W041 872 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 FAM166AQ6J272 317 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 CPEB2Q7Z5Q1 589 aaKnown RBP3.02□□□□□ -1.93
SCFD1-210ENST00000553693 Q8N7P7 452 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 HDAC11Q96DB2 347 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 ZMAT2Q96NC0 199 aaKnown RBP3.02□□□□□ -1.93
SCFD1-210ENST00000553693 GBP5Q96PP8 586 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 IL12RB2Q99665 862 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 HNRNPABQ99729 332 aaKnown RBP3.02□□□□□ -1.93
SCFD1-210ENST00000553693 XAB2Q9HCS7 855 aaKnown RBP3.02□□□□□ -1.93
SCFD1-210ENST00000553693 TNFRSF19Q9NS68 423 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 EXOC1Q9NV70 894 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 ZNF581Q9P0T4 197 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 B4GALT7Q9UBV7 327 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 POLLQ9UGP5 575 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 ADGRL2O95490 1459 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 ANKRD50Q9ULJ7 1429 aa3.02□□□□□ -1.93
SCFD1-210ENST00000553693 NINLQ9Y2I6 1382 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 PTPN23Q9H3S7 1636 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 A8MVM7 634 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 ARHGEF33A8MVX0 844 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 ECE2O60344 883 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 NR2F1P10589 423 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 F3P13726 295 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 RIDAP52758 137 aaKnown RBP3.01□□□□□ -1.93
SCFD1-210ENST00000553693 IFI35P80217 286 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-210ENST00000553693 RBPJQ06330 500 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 ACSM1Q08AH1 577 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 AIMP1Q12904 312 aaKnown RBP3.01□□□□□ -1.93
SCFD1-210ENST00000553693 FHL5Q5TD97 284 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 MACC1Q6ZN28 852 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 RTL3Q8N8U3 475 aaKnown RBP3.01□□□□□ -1.93
SCFD1-210ENST00000553693 CCDC63Q8NA47 563 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 KCTD6Q8NC69 237 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 OR5M9Q8NGP3 310 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 AGAP11Q8TF27 550 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 C11orf52Q96A22 123 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 SPSB1Q96BD6 273 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 PYCR2Q96C36 320 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 SERAC1Q96JX3 654 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 NEDD4LQ96PU5 975 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 MOB1AQ9H8S9 216 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 GRPEL1Q9HAV7 217 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 PKD2L2Q9NZM6 624 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 CLIP2Q9UDT6 1046 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 ANAPC5Q9UJX4 755 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 AUP1Q9Y679 476 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 E9PCH4 1651 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 USP32Q8NFA0 1604 aa3.01□□□□□ -1.93
SCFD1-210ENST00000553693 LRPPRCP42704 1394 aaKnown RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 RGPD1P0DJD0 1748 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 TNS1Q9HBL0 1735 aaKnown RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 H7C0S8 307 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 TNFSF12O43508 249 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 CELF2O95319 508 aaKnown RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 VDRP11473 427 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 CD59P13987 128 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 SELEP16581 610 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 EPORP19235 508 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 AZGP1P25311 298 aaKnown RBP3□□□□□ -1.93
SCFD1-210ENST00000553693 GIFP27352 417 aa3□□□□□ -1.93
SCFD1-210ENST00000553693 MC5RP33032 325 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms