RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 MARCH9Q86YJ5 346 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 TMEM132CQ8N3T6 1108 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 KRTCAP2Q8N6L1 136 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 OR5T3Q8NGG3 340 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 OR9I1Q8NGQ6 314 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 COL26A1Q96A83 441 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 METTL2AQ96IZ6 378 aaKnown RBP9.26□□□□□ -0.93
CHD8-204ENST00000553622 ZNF285Q96NJ3 590 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 ZNF717Q9BY31 904 aaPredicted RBP9.26□□□□□ -0.93
CHD8-204ENST00000553622 RBCK1Q9BYM8 510 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 MYLK2Q9H1R3 596 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 DDX31Q9H8H2 851 aaKnown RBP9.26□□□□□ -0.93
CHD8-204ENST00000553622 LHX9Q9NQ69 397 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 CCDC167Q9P0B6 97 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 HCN3Q9P1Z3 774 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 ADAM29Q9UKF5 820 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 SRPK3Q9UPE1 567 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 SATB2Q9UPW6 733 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 GPR45Q9Y5Y3 372 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 SLC22A7Q9Y694 548 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 SPACA6W5XKT8 324 aa9.26□□□□□ -0.93
CHD8-204ENST00000553622 PMS2P1A4D2B8 440 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FITM1A5D6W6 292 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 B4E171 279 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 PLD2O14939 933 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 DSCR3O14972 297 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 GUCY1B2O75343 617 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 PRKRAO75569 313 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 SLC22A3O75751 556 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 IL3P08700 152 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 SMIM10L1P0DMW3 83 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FGF5P12034 268 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 COX7A2P14406 83 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ACPPP15309 386 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 SDHBP21912 280 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FBLP22087 321 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 CPN2P22792 545 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 PIK3R1P27986 724 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ETV5P41161 510 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 TSPAN7P41732 249 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 OR1D4P47884 311 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ATP4BP51164 291 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ARFIP1P53367 373 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 HNRNPH2P55795 449 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 SHC2P98077 582 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 MAT1AQ00266 395 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 KLF10Q13118 480 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 TARDBPQ13148 414 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD8-204ENST00000553622 RUNX2Q13950 521 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 PGS1Q32NB8 556 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 PDCD4Q53EL6 469 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 DCAF12Q5T6F0 453 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ARHGAP40Q5TG30 622 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 YOD1Q5VVQ6 348 aaPredicted RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 ANKRD26P1Q6NSI1 321 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 GALNT18Q6P9A2 607 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 CEACAM20Q6UY09 585 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 GK5Q6ZS86 529 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 TRPM8Q7Z2W7 1104 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 GPR180Q86V85 440 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 BPHLQ86WA6 291 aaPredicted RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 FAM9CQ8IZT9 166 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 MMP21Q8N119 569 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ZCCHC7Q8N3Z6 543 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 BMPERQ8N8U9 685 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FAM47BQ8NA70 645 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 PMEPA1Q969W9 287 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 LIN37Q96GY3 246 aaPredicted RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 SMIM10Q96HG1 83 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 EGLN2Q96KS0 407 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FCRL1Q96LA6 429 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 MAPKAP1Q9BPZ7 522 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 RTKNQ9BST9 563 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FAIM2Q9BWQ8 316 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 ULBP3Q9BZM4 244 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 MYNNQ9NPC7 610 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 MIEF1Q9NQG6 463 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 FBXO8Q9NRD0 319 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 LYARQ9NX58 379 aaKnown RBP9.25□□□□□ -0.93
CHD8-204ENST00000553622 ASIC5Q9NY37 505 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 PHF11Q9UIL8 331 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 CDC14AQ9UNH5 594 aa9.25□□□□□ -0.93
CHD8-204ENST00000553622 A0A1B0GX78 115 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 GLOD5A6NK44 160 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 CCT8L1PA6NM43 557 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 H3BMH7 237 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 CHST10O43529 356 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 FOXS1O43638 330 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 DNAJB6O75190 326 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 KIAA0754O94854 1291 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 DKK1O94907 266 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 NSA2O95478 260 aaKnown RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 HBQ1P09105 142 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 NR2F6P10588 404 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 PRPS1L1P21108 318 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 GPX3P22352 226 aa9.24□□□□□ -0.93
CHD8-204ENST00000553622 TLX1P31314 330 aaPredicted RBP9.24□□□□□ -0.93
CHD8-204ENST00000553622 BUD31P41223 144 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms