RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RGMAQ96B86 450 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 QRFPRQ96P65 431 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 MESP1Q9BRJ9 268 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 NUDT9Q9BW91 350 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 ELOVL6Q9H5J4 265 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 LANCL2Q9NS86 450 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 EMCNQ9ULC0 261 aa17.41■□□□□ 0.38
PRPF40B-216ENST00000552301 IGHV1-45A0A0A0MS14 117 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 A0A1W2PQ72 361 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 MAGEB17A8MXT2 336 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 SAP18O00422 153 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 PLIN3O60664 434 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 PRMT3O60678 531 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 DNAJB6O75190 326 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 MLYCDO95822 493 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 PROCP04070 461 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 IMPDH1P20839 514 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 PTX3P26022 381 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 RHAGQ02094 409 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 SLC18A2Q05940 514 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 ACTN3Q08043 901 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 UNC50Q53HI1 259 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 DEPDC1Q5TB30 811 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 FRG2Q64ET8 278 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 QSOX2Q6ZRP7 698 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 SH2D5Q6ZV89 423 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 TRABD2AQ86V40 505 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 KBTBD2Q8IY47 623 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 SHISA5Q8N114 240 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 RNF175Q8N4F7 328 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 CCNYL1Q8N7R7 359 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 TEX19Q8NA77 164 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 PLPP5Q8NEB5 264 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 TM9SF4Q92544 642 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 TSLPQ969D9 159 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 APOPT1Q96IL0 206 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 THOC3Q96J01 351 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 PTCHD1Q96NR3 888 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 FRG2BQ96QU4 278 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 TUBB6Q9BUF5 446 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 LHPPQ9H008 270 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 ZNF700Q9H0M5 742 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 SCN2AQ99250 2005 aa17.4■□□□□ 0.38
PRPF40B-216ENST00000552301 ATMQ13315 3056 aa17.39■□□□□ 0.38
PRPF40B-216ENST00000552301 OR2W5A6NFC9 320 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 B8ZZF3 427 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 K7EM74 188 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 RTCAO00442 366 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 CLDN4O14493 209 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 DPM1O60762 260 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 SEC24DO94855 1032 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 ICAM2P13598 275 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 HIST1H1TP22492 207 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 ATP5A1P25705 553 aaKnown RBP17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 EFNA3P52797 238 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 SOX8P57073 446 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 NAA20P61599 178 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 KLRB1Q12918 225 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 RUNX2Q13950 521 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 PCOLCEQ15113 449 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 SGO1Q5FBB7 561 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 CFAP157Q5JU67 520 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 GPRIN3Q6ZVF9 776 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 PRICKLE2Q7Z3G6 844 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 ANKRD37Q7Z713 158 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 HPS6Q86YV9 775 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 FAM47BQ8NA70 645 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 WDR20Q8TBZ3 569 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 L3HYPDHQ96EM0 354 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 SMC6Q96SB8 1091 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 ZNF382Q96SR6 550 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 SERPINI1Q99574 410 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 LPAR4Q99677 370 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 TMEM109Q9BVC6 243 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 PRDM9Q9NQV7 894 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 PRDM7Q9NQW5 492 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 TRPS1Q9UHF7 1281 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 DAPP1Q9UN19 280 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 SNX6Q9UNH7 406 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 MMACHCQ9Y4U1 282 aa17.39■□□□□ 0.37
PRPF40B-216ENST00000552301 IGHV3-20A0A0C4DH32 117 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 FAM227AF5H4B4 570 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 FOXE1O00358 373 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 PDGFAP04085 211 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 CPA3P15088 417 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 TSFMP43897 325 aaKnown RBP17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 NEK2P51955 445 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 LIM2P55344 173 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 OR4D2P58180 307 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 LCP2Q13094 533 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 SFT2D3Q587I9 215 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 AGAP7PQ5VUJ5 663 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 OR4C11Q6IEV9 310 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 LETMD1Q6P1Q0 360 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 ACOT4Q8N9L9 421 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 MYRIPQ8NFW9 859 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 SELENOMQ8WWX9 145 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 MTFMTQ96DP5 389 aaKnown RBP17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 AGAP4Q96P64 663 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms