RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 KLF11O14901 512 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 HCRTR1O43613 425 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ALOX12BO75342 701 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ATP5HO75947 161 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 KLK3P07288 261 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 PPP2R1BP30154 601 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 HOXD11P31277 338 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 HNRNPH1P31943 449 aaKnown RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 SLC18A1P54219 525 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 LIPEQ05469 1076 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 GPR68Q15743 365 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 PERM1Q5SV97 790 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 OR4C11Q6IEV9 310 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 MICU2Q8IYU8 434 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 SHISA5Q8N114 240 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 AMER2Q8N7J2 671 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ANKRD53Q8N9V6 530 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 OR2L8Q8NGY9 312 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 COL25A1Q9BXS0 654 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 APMAPQ9HDC9 416 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 SLC6A20Q9NP91 592 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ATAD3AQ9NVI7 634 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 MKS1Q9NXB0 559 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 PDPK1O15530 556 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ZSCAN9O15535 394 aaPredicted RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 NDUFB5O43674 189 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 LILRB5O75023 590 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 CCL4P13236 92 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 LSSP48449 732 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 LTB4RQ15722 352 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 CAPRIN2Q6IMN6 1127 aaKnown RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ABHD13Q7L211 337 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 RP9Q8TA86 221 aaKnown RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 USP7Q93009 1102 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 C8orf44Q96CB5 159 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 CADM1Q9BY67 442 aaKnown RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ULBP3Q9BZM4 244 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 RPF2Q9H7B2 306 aaKnown RBP7.78□□□□□ -1.16
CHPT1-208ENST00000552215 ATG4BQ9Y4P1 393 aa7.78□□□□□ -1.16
CHPT1-208ENST00000552215 LNP1A1A4G5 178 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 GSC2O15499 205 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 DYRK3O43781 588 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 DNAJB6O75190 326 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 KLHL18O94889 574 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 MAOAP21397 527 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ME2P23368 584 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 PKLRP30613 574 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 TIA1P31483 386 aaKnown RBP eCLIP7.77□□□□□ -1.163e-9■■■■□ 20.5
CHPT1-208ENST00000552215 OC90Q02509 493 aaPredicted RBP7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ZNF763Q0D2J5 394 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ZC3H12BQ5HYM0 836 aaKnown RBP7.77□□□□□ -1.16
CHPT1-208ENST00000552215 C6orf132Q5T0Z8 1188 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 DEPDC1Q5TB30 811 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 GRHL2Q6ISB3 625 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 RRM2BQ7LG56 351 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 SPATA19Q7Z5L4 167 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 B3GNT8Q7Z7M8 397 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 RNF130Q86XS8 419 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ULK2Q8IYT8 1036 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 KIRREL3Q8IZU9 778 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ARL10Q8N8L6 244 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 C19orf47Q8N9M1 422 aaKnown RBP7.77□□□□□ -1.16
CHPT1-208ENST00000552215 OR56A3Q8NH54 315 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ADAMTS15Q8TE58 950 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 SLC35A5Q9BS91 424 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ASPSCR1Q9BZE9 553 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 TMEM9BQ9NQ34 198 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 SEMA4GQ9NTN9 838 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 TMEM184CQ9NVA4 438 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 ANKRD10Q9NXR5 420 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 C6orf203Q9P0P8 240 aaPredicted RBP7.77□□□□□ -1.16
CHPT1-208ENST00000552215 TRPS1Q9UHF7 1281 aa7.77□□□□□ -1.16
CHPT1-208ENST00000552215 MRPS33Q9Y291 106 aaKnown RBP7.77□□□□□ -1.16
CHPT1-208ENST00000552215 NPIPA5A0A0B4J1W7 369 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 A0A1W2PS29 197 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 HYKKA2RU49 373 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 AGAP14A8MT82 685 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 NPIPA7E9PJI5 369 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 ZNF749O43361 778 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 RSL1D1O76021 490 aaKnown RBP7.77□□□□□ -1.17
CHPT1-208ENST00000552215 CPNE6O95741 557 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 NPIPA8P0DM63 369 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 XRCC1P18887 633 aaPredicted RBP7.77□□□□□ -1.17
CHPT1-208ENST00000552215 TNFRSF1BP20333 461 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 ITPKBP27987 946 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 RPS9P46781 194 aaKnown RBP7.77□□□□□ -1.17
CHPT1-208ENST00000552215 ALDH6A1Q02252 535 aaKnown RBP7.77□□□□□ -1.17
CHPT1-208ENST00000552215 ILF2Q12905 390 aaKnown RBP7.77□□□□□ -1.17
CHPT1-208ENST00000552215 TMEM164Q5U3C3 297 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 FIGNL1Q6PIW4 674 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 ABRAXAS1Q6UWZ7 409 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 DHFR2Q86XF0 187 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 DCP2Q8IU60 420 aaKnown RBP7.77□□□□□ -1.17
CHPT1-208ENST00000552215 ADGRF3Q8IZF5 1079 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 TRIML2Q8N7C3 387 aa7.77□□□□□ -1.17
CHPT1-208ENST00000552215 SRFBP1Q8NEF9 429 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms