RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 MAPKAP1Q9BPZ7 522 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 EFCAB11Q9BUY7 163 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 PITHD1Q9GZP4 211 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ZBTB26Q9HCK0 441 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 STMN3Q9NZ72 180 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 RNF11Q9Y3C5 154 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 COPG1Q9Y678 874 aaKnown RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 A0A087WUV0 522 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 WASHC1A8K0Z3 465 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 KLHL41O60662 606 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 VPS4BO75351 444 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ETHE1O95571 254 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 PCNAP12004 261 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 GFAPP14136 432 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ATP5A1P25705 553 aaKnown RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 TSFMP43897 325 aaKnown RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 NEK2P51955 445 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ALDH18A1P54886 795 aaKnown RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ACTN3Q08043 901 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 GTF2H2Q13888 395 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 SLC29A2Q14542 456 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 IRAK1BP1Q5VVH5 260 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 GRHL2Q6ISB3 625 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 GTF2H2CQ6P1K8 395 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 CYP4X1Q8N118 509 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 BEST3Q8N1M1 668 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 PTGR2Q8N8N7 351 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 TTLQ8NG68 377 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 OR52B6Q8NGF0 335 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 HUS1BQ8NHY5 278 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 M1APQ8TC57 530 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ELP5Q8TE02 316 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 TM9SF4Q92544 642 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 UCN3Q969E3 161 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 PHF21BQ96EK2 531 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 SIGLEC12Q96PQ1 595 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF717Q9BY31 904 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 HES7Q9BYE0 225 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 TSPYL1Q9H0U9 437 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 EPS8L2Q9H6S3 715 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 CLK4Q9HAZ1 481 aaKnown RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 MMP25Q9NPA2 562 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 PRDM9Q9NQV7 894 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ANKRD10Q9NXR5 420 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 C19orf25Q9UFG5 118 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF180Q9UJW8 692 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF223Q9UK11 482 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-221ENST00000550100 VPS4AQ9UN37 437 aa11.06□□□□□ -0.64
LETMD1-221ENST00000550100 URADA6NGE7 173 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 SYCE1LA8MT33 242 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ABHD2P08910 425 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ICAM2P13598 275 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 EPB42P16452 691 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 EEF1DP29692 281 aaKnown RBP11.05□□□□□ -0.64
LETMD1-221ENST00000550100 SERPINB9P50453 376 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 GPR143P51810 404 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 RAB38P57729 211 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ARG2P78540 354 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF33BQ06732 778 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 LAPTM5Q13571 262 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 TLR1Q15399 786 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
LETMD1-221ENST00000550100 MED27Q6P2C8 311 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 CEP128Q6ZU80 1094 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 CCDC91Q7Z6B0 441 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 CLNKQ7Z7G1 428 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF227Q86WZ6 799 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 ACOT4Q8N9L9 421 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 MZB1Q8WU39 189 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
LETMD1-221ENST00000550100 SEC16BQ96JE7 1060 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 FAR2Q96K12 515 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 SERINC2Q96SA4 455 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 MTERF1Q99551 399 aaKnown RBP11.05□□□□□ -0.64
LETMD1-221ENST00000550100 NPLQ9BXD5 320 aaPredicted RBP11.05□□□□□ -0.64
LETMD1-221ENST00000550100 IPPKQ9H8X2 491 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 L2HGDHQ9H9P8 463 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 KCNK13Q9HB14 408 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 XPR1Q9UBH6 696 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 DAPP1Q9UN19 280 aa11.05□□□□□ -0.64
LETMD1-221ENST00000550100 EXOC1LA0A1B0GW35 172 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 B3GALT2O43825 422 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 PRKNO60260 465 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 PRKRAO75569 313 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 SHBGP04278 402 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 SNRPAP09012 282 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 TSPAN8P19075 237 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 JAK1P23458 1154 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 GSTM2P28161 218 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 CD96P40200 585 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 MTTPP55157 894 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 RPS13P62277 151 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 PMP22Q01453 160 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 ID2Q02363 134 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms