RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 FAM45AQ8TCE6 357 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 GRK7Q8WTQ7 553 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 RND1Q92730 232 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 CFAP36Q96G28 342 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 VMP1Q96GC9 406 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 SEC16BQ96JE7 1060 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 TIMMDC1Q9NPL8 285 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
RAB5C-205ENST00000550013 PPIEQ9UNP9 301 aaKnown RBP14.34□□□□□ -0.11
RAB5C-205ENST00000550013 ERVK-11Q9UQG0 969 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 PPP2R2CQ9Y2T4 447 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 NPEPPSL1A6NEC2 478 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 TMEM200CA6NKL6 621 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 FAM166BA8MTA8 275 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 OR2J2O76002 312 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 TUBB4AP04350 444 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 SAT1P21673 171 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 MSX1P28360 303 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 HNRNPH1P31943 449 aaKnown RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 FNTAP49354 379 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 CCZ1BP86790 482 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 CCZ1P86791 482 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 PMPCAQ10713 525 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 PPP1R7Q15435 360 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 TERF2Q15554 542 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 XKR6Q5GH73 641 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 TRMT10BQ6PF06 316 aaKnown RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 CLNKQ7Z7G1 428 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 FAM47BQ8NA70 645 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 PSD4Q8NDX1 1056 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 GAL3ST3Q96A11 431 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 PDLIM5Q96HC4 596 aaKnown RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 PWWP2AQ96N64 755 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 CCDC77Q9BR77 488 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 KCNJ16Q9NPI9 418 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 PRTFDC1Q9NRG1 225 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 TNFRSF10DQ9UBN6 386 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 ASIC3Q9UHC3 531 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 CORO1CQ9ULV4 474 aaPredicted RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 YARS2Q9Y2Z4 477 aaKnown RBP14.33□□□□□ -0.12
RAB5C-205ENST00000550013 KCNE2Q9Y6J6 123 aa14.33□□□□□ -0.12
RAB5C-205ENST00000550013 MYOCOSA0A1B0GUC4 107 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 A8MVJ9 347 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 G3V3Y1 287 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 ERI3O43414 337 aaKnown RBP14.32□□□□□ -0.12
RAB5C-205ENST00000550013 ZFAND5O76080 213 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 OR6B1O95007 311 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 GDF5P43026 501 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 RAB38P57729 211 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 STXBP1P61764 594 aaKnown RBP14.32□□□□□ -0.12
RAB5C-205ENST00000550013 PPIAP62937 165 aaKnown RBP14.32□□□□□ -0.12
RAB5C-205ENST00000550013 PLGLB1Q02325 96 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 SLC13A2Q13183 592 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 ZNF460Q14592 562 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 IL20RBQ6UXL0 311 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 DMRTC2Q8IXT2 367 aaPredicted RBP14.32□□□□□ -0.12
RAB5C-205ENST00000550013 OR2M7Q8NG81 312 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 CCT6BQ92526 530 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 MS4A6EQ96DS6 147 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 FAR2Q96K12 515 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 QRFPRQ96P65 431 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 EGFL8Q99944 293 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 WDR83Q9BRX9 315 aaKnown RBP14.32□□□□□ -0.12
RAB5C-205ENST00000550013 NAT9Q9BTE0 207 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 PNPLA3Q9NST1 481 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 HPF1Q9NWY4 346 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 CHMP2BQ9UQN3 213 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 JRKLQ9Y4A0 524 aa14.32□□□□□ -0.12
RAB5C-205ENST00000550013 FOXO6A8MYZ6 492 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 NPIPA2E9PIF3 369 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 NPIPA3F8WFD2 350 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 WDR47O94967 919 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 C1GALT1C1LP0DN25 315 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ZNF37AP17032 561 aaPredicted RBP14.31□□□□□ -0.12
RAB5C-205ENST00000550013 SOX3P41225 446 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ELK3P41970 407 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ART1P52961 327 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 HSD17B7P56937 341 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 SLBPQ14493 270 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB5C-205ENST00000550013 SLCO4C1Q6ZQN7 724 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 TMEM200AQ86VY9 491 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 LRRC8AQ8IWT6 810 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 KLHDC8AQ8IYD2 350 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 OR5M9Q8NGP3 310 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 OR5M3Q8NGP4 307 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ASB15Q8WXK1 588 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 NRGNQ92686 78 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 CSF3RQ99062 836 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ZNF559Q9BR84 538 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 NPLQ9BXD5 320 aaPredicted RBP14.31□□□□□ -0.12
RAB5C-205ENST00000550013 TTTY12Q9BZ98 90 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ZDHHC11Q9H8X9 412 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 ADAP2Q9NPF8 381 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 LIPGQ9Y5X9 500 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 PSAT1Q9Y617 370 aa14.31□□□□□ -0.12
RAB5C-205ENST00000550013 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.12
RAB5C-205ENST00000550013 LRIT2A6NDA9 550 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms