RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 GABPB1Q06547 395 aaPredicted RBP15.34■□□□□ 0.05
SSH1-208ENST00000548522 CASP8Q14790 479 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 CRYMQ14894 314 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 DUPD1Q68J44 220 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 MAATS1Q7Z4T9 603 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 STRA8Q7Z7C7 330 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 TMEM200AQ86VY9 491 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 PALM2Q8IXS6 379 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 LMNTD2Q8IXW0 634 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 CA13Q8N1Q1 262 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 NAT8LQ8N9F0 302 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 B3GNT7Q8NFL0 401 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 LILRB4Q8NHJ6 448 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 CALML6Q8TD86 181 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 MS4A14Q96JA4 679 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 LRRC1Q9BTT6 524 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 SLC6A16Q9GZN6 736 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 DEFB127Q9H1M4 99 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 LIN28AQ9H9Z2 209 aaKnown RBP15.34■□□□□ 0.05
SSH1-208ENST00000548522 IGSF5Q9NSI5 407 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 TAS2R13Q9NYV9 303 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 KCMF1Q9P0J7 381 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 FBXW2Q9UKT8 454 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 CLDN16Q9Y5I7 305 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 A0A0G2JN53 185 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 FAM166BA8MTA8 275 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 G3V3Y1 287 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 KLRC4-KLRK1H3BQV0 150 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 CDK2AP1O14519 115 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 SASH3O75995 380 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 SEC31AO94979 1220 aaKnown RBP15.33■□□□□ 0.04
SSH1-208ENST00000548522 HIST1H2AGP0C0S8 130 aaPredicted RBP15.33■□□□□ 0.04
SSH1-208ENST00000548522 SMIM10L1P0DMW3 83 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 RNH1P13489 461 aaKnown RBP15.33■□□□□ 0.04
SSH1-208ENST00000548522 HIST1H2ADP20671 130 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 NUP107P57740 925 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 SKP1P63208 163 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 PMPCAQ10713 525 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 TMPRSS11BQ86T26 416 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 DMRTC2Q8IXT2 367 aaPredicted RBP15.33■□□□□ 0.04
SSH1-208ENST00000548522 TMEM156Q8N614 296 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 TMEM52Q8NDY8 209 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 SMIM10Q96HG1 83 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 HIST1H2AHQ96KK5 128 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 HIST1H2AJQ99878 128 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 H2AFJQ9BTM1 129 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 TP63Q9H3D4 680 aaPredicted RBP15.33■□□□□ 0.04
SSH1-208ENST00000548522 MED4Q9NPJ6 270 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 HOMER3Q9NSC5 361 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 LIPGQ9Y5X9 500 aa15.33■□□□□ 0.04
SSH1-208ENST00000548522 INTS1Q8N201 2190 aaKnown RBP15.33■□□□□ 0.04
SSH1-208ENST00000548522 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 TMEM200CA6NKL6 621 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 PSMD12O00232 456 aaPredicted RBP15.32■□□□□ 0.04
SSH1-208ENST00000548522 AHSGP02765 367 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 AHRP35869 848 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 CLCN2P51788 898 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 CSHL1Q14406 222 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 KRTAP21-3Q3LHN1 58 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 XKR6Q5GH73 641 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 TOR1AIP1Q5JTV8 583 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 ARHGAP11AQ6P4F7 1023 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 SCUBE1Q8IWY4 988 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 MREGQ8N565 214 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 OR5M9Q8NGP3 310 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 CREB3L4Q8TEY5 395 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 ASB5Q8WWX0 329 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 RND1Q92730 232 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 NCLNQ969V3 563 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 MAGOHBQ96A72 148 aaKnown RBP15.32■□□□□ 0.04
SSH1-208ENST00000548522 FBXL8Q96CD0 374 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 PLAC1Q9HBJ0 212 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 PNO1Q9NRX1 252 aaKnown RBP15.32■□□□□ 0.04
SSH1-208ENST00000548522 PNPLA3Q9NST1 481 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 DMGDHQ9UI17 866 aaKnown RBP15.32■□□□□ 0.04
SSH1-208ENST00000548522 NAV3Q8IVL0 2385 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 ACANP16112 2415 aa15.32■□□□□ 0.04
SSH1-208ENST00000548522 AKAP6Q13023 2319 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 NPIPA2E9PIF3 369 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 NPIPA3F8WFD2 350 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 OR2J2O76002 312 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 OR6B1O95007 311 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 CD1EP15812 388 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 PGAM1P18669 254 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 DNAJA1P31689 397 aaKnown RBP15.31■□□□□ 0.04
SSH1-208ENST00000548522 GPR143P51810 404 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 AP1S2P56377 157 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 RBBP5Q15291 538 aaKnown RBP15.31■□□□□ 0.04
SSH1-208ENST00000548522 CYP1B1Q16678 543 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 MSS51Q4VC12 460 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 SBSNQ6UWP8 590 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 IGDCC3Q8IVU1 814 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.31■□□□□ 0.04
SSH1-208ENST00000548522 PSD4Q8NDX1 1056 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 ZNF559Q9BR84 538 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 KCNJ16Q9NPI9 418 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 HCFC1P51610 2035 aa15.31■□□□□ 0.04
SSH1-208ENST00000548522 HRNRQ86YZ3 2850 aaPredicted RBP15.3■□□□□ 0.04
SSH1-208ENST00000548522 MYOCOSA0A1B0GUC4 107 aa15.3■□□□□ 0.04
SSH1-208ENST00000548522 NADKO95544 446 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms