RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 C16orf47Q6ZP98 133 aaPredicted RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 MAATS1Q7Z4T9 603 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 UBE3DQ7Z6J8 389 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 SPPL2CQ8IUH8 684 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 CHERPQ8IWX8 916 aaKnown RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 KRT78Q8N1N4 520 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 C17orf53Q8N3J3 647 aaPredicted RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 TCAIMQ8N3R3 496 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 CPSF7Q8N684 471 aaKnown RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 FAM47BQ8NA70 645 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 PDPRQ8NCN5 879 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 TTLQ8NG68 377 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 CDKL2Q92772 493 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 MARVELD3Q96A59 401 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 KIAA1191Q96A73 305 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 WDR34Q96EX3 536 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 TSPAN17Q96FV3 270 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 F2RL3Q96RI0 385 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 CSF3RQ99062 836 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 CAPS2Q9BXY5 557 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 DEFB126Q9BYW3 111 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 REXO4Q9GZR2 422 aaKnown RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 EHD1Q9H4M9 534 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 PRDM7Q9NQW5 492 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 PRTFDC1Q9NRG1 225 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 PNO1Q9NRX1 252 aaKnown RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 WWOXQ9NZC7 414 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 CD274Q9NZQ7 290 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 PPIEQ9UNP9 301 aaKnown RBP12.46□□□□□ -0.41
CPSF6-204ENST00000547486 MMACHCQ9Y4U1 282 aa12.46□□□□□ -0.41
CPSF6-204ENST00000547486 TRBV11-1A0A0K0K1C0 115 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 ANKDD1BA6NHY2 528 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CDK2AP1O14519 115 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CLGNO14967 610 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 HNRNPRO43390 633 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 PRKNO60260 465 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 LIM2P55344 173 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 HSD17B7P56937 341 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 RAB38P57729 211 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 RAB10P61026 200 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 ADORA2A-AS1P86434 159 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 ILF2Q12905 390 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 SLC13A2Q13183 592 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CDSNQ15517 529 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 PDK4Q16654 411 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 KBTBD12Q3ZCT8 623 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 XKR6Q5GH73 641 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CDKL4Q5MAI5 379 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 MYO7BQ6PIF6 2116 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 Q6ZPB1 254 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CLNKQ7Z7G1 428 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CMC1Q7Z7K0 106 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 ISCA2Q86U28 154 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CTAGE3PQ8IX95 158 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 SRRM1Q8IYB3 904 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 SNX31Q8N9S9 440 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 ARMC2Q8NEN0 867 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 B3GNT7Q8NFL0 401 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 OR2L5Q8NG80 312 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 FBXO25Q8TCJ0 367 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 PTCD3Q96EY7 689 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 SEC16BQ96JE7 1060 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 SERINC2Q96SA4 455 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 PITHD1Q9GZP4 211 aaPredicted RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 CNOT10Q9H9A5 744 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 LIN28AQ9H9Z2 209 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 KCMF1Q9P0J7 381 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 TXNDC16Q9P2K2 825 aa12.45□□□□□ -0.42
CPSF6-204ENST00000547486 SUCOQ9UBS9 1254 aaKnown RBP12.45□□□□□ -0.42
CPSF6-204ENST00000547486 TMEM200CA6NKL6 621 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 B3GALT2O43825 422 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 CCNT2O60583 730 aaKnown RBP12.44□□□□□ -0.42
CPSF6-204ENST00000547486 GSTA2P09210 222 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 SLC35E2BP0CK96 405 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 CERS1P27544 350 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 GSTM2P28161 218 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 MAGEA4P43358 317 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 CLCN2P51788 898 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 CHIT1Q13231 466 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 TERF2Q15554 542 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 GRTP1Q5TC63 336 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 TRIM40Q6P9F5 258 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 NCCRP1Q6ZVX7 275 aaPredicted RBP12.44□□□□□ -0.42
CPSF6-204ENST00000547486 MDGA2Q7Z553 956 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 SULF2Q8IWU5 870 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 ZNF808Q8N4W9 903 aaPredicted RBP12.44□□□□□ -0.42
CPSF6-204ENST00000547486 PPM1NQ8N819 430 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 FBF1Q8TES7 1133 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 EXT2Q93063 718 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 NCLNQ969V3 563 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 CD244Q9BZW8 370 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 ALG9Q9H6U8 611 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 IGSF5Q9NSI5 407 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 FBXW2Q9UKT8 454 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 RNF112Q9ULX5 631 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 DAPP1Q9UN19 280 aa12.44□□□□□ -0.42
CPSF6-204ENST00000547486 KLF2Q9Y5W3 355 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms