RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 PTRHD1Q6GMV3 140 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 RTL4Q6ZR62 310 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 SPNS2Q8IVW8 549 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 GPALPP1Q8IXQ4 340 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 NEIL3Q8TAT5 605 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 MAGEC3Q8TD91 643 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 ZNF480Q8WV37 535 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 ROBO4Q8WZ75 1007 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 ZBED6CLQ96FA7 236 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 FOPNLQ96NB1 174 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 WFIKKN1Q96NZ8 548 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 KLHL28Q9NXS3 571 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 ZFATQ9P243 1243 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 MYOTQ9UBF9 498 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 MYO1CO00159 1063 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 PSTPIP1O43586 416 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 ZFAND5O76080 213 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 SLC16A8O95907 504 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 JAK1P23458 1154 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 ABATP80404 500 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 DEFB134Q4QY38 66 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 RNF187Q5TA31 235 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 NSUN5P2Q63ZY6 315 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 QSOX2Q6ZRP7 698 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 PLEKHM3Q6ZWE6 761 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 OTOAQ7RTW8 1153 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 C9orf106Q8NAJ2 232 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 CAMKVQ8NCB2 501 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 TRIM58Q8NG06 486 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 SLC13A3Q8WWT9 602 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 FAM136AQ96C01 138 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 VMP1Q96GC9 406 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 ZNF778Q96MU6 729 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 TRIB1Q96RU8 372 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 TIMP4Q99727 224 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 EBNA1BP2Q99848 306 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 ZNF703Q9H7S9 590 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 PNO1Q9NRX1 252 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 SACM1LQ9NTJ5 587 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 DDX56Q9NY93 547 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 MARCH4Q9P2E8 410 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 NDRG3Q9UGV2 375 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 ATG4BQ9Y4P1 393 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 MRFAP1Q9Y605 127 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 SLC22A7Q9Y694 548 aa14.15□□□□□ -0.14
CLSTN3-216ENST00000545663 RAI1Q7Z5J4 1906 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 C15orf38-AP3S2A0A0A6YYH1 394 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 MACROD2A1Z1Q3 448 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 MIF4GDA9UHW6 222 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 GALR3O60755 368 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 CETN2P41208 172 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 CPA2P48052 419 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 RPS15AP62244 130 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 MEF2AQ02078 507 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 THEMIS2Q5TEJ8 643 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 MEI1Q5TIA1 1274 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 PLXDC2Q6UX71 529 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 ASPGQ86U10 573 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 LRRC56Q8IYG6 542 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 AFAP1L2Q8N4X5 818 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 ZNF740Q8NDX6 193 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 OR4L1Q8NH43 312 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 HSPBAP1Q96EW2 488 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 TTC1Q99614 292 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 FAM118BQ9BPY3 351 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 CCDC77Q9BR77 488 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 HEMGNQ9BXL5 484 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 RHBGQ9H310 441 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 SH2D2AQ9NP31 389 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 PRDM9Q9NQV7 894 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 SH2B3Q9UQQ2 575 aa14.14□□□□□ -0.15
CLSTN3-216ENST00000545663 hCG_1818297A0A087WSY0 165 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 PRMT5O14744 637 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 SNPHO15079 494 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 IL18BPO95998 194 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 P04436 131 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 LOXP28300 417 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 CRYZQ08257 329 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 ARHGAP19Q14CB8 494 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 HECTD2Q5U5R9 776 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 AFTPHQ6ULP2 937 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 PEX26Q7Z412 305 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 KLHDC8BQ8IXV7 354 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 UBL4BQ8N7F7 174 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 P2RY12Q9H244 342 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 KCNF1Q9H3M0 494 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 ACKR4Q9NPB9 350 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 TMEM184CQ9NVA4 438 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 SAMD15Q9P1V8 674 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 GALPQ9UBC7 116 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 CDC42EP3Q9UKI2 254 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 PPIEQ9UNP9 301 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 HEATR5AQ86XA9 2040 aa14.13□□□□□ -0.15
CLSTN3-216ENST00000545663 MBD3L3A6NE82 208 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms