RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 NKAIN2Q5VXU1 208 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ARMC6Q6NXE6 501 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 IRGCQ6NXR0 463 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 SHISA5Q8N114 240 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 DTWD1Q8N5C7 304 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 OR4A15Q8NGL6 344 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ZCCHC10Q8TBK6 192 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ZFYVE21Q9BQ24 234 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 SLAMF7Q9NQ25 335 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ADAMTS9Q9P2N4 1935 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 SCN2AQ99250 2005 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 GLOD5A6NK44 160 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 H0YGG7 62 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 FAM58BPP0C7Q3 252 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 GZMMP51124 257 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ARF3P61204 181 aaPredicted RBP23.32■■□□□ 1.32
TTC3-225ENST00000540756 BTN3A2P78410 334 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 RHDQ02161 417 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ANXA8L1Q5VT79 327 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 TRIM40Q6P9F5 258 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 PIGKQ92643 395 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 LRGUKQ96M69 825 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 ELF4Q99607 663 aaPredicted RBP23.32■■□□□ 1.32
TTC3-225ENST00000540756 RPF2Q9H7B2 306 aaKnown RBP23.32■■□□□ 1.32
TTC3-225ENST00000540756 BCAP29Q9UHQ4 241 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 MRPS2Q9Y399 296 aaKnown RBP23.32■■□□□ 1.32
TTC3-225ENST00000540756 ATG4BQ9Y4P1 393 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 SNX13Q9Y5W8 968 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 RNF215Q9Y6U7 377 aa23.32■■□□□ 1.32
TTC3-225ENST00000540756 CLIC1O00299 241 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 PROS1P07225 676 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 FXNQ16595 210 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 DEFB110Q30KQ9 67 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 NDUFAF5Q5TEU4 345 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 LCN8Q6JVE9 175 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 FAM92BQ6ZTR7 304 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 FAM47BQ8NA70 645 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 VPS37AQ8NEZ2 397 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 OR2T12Q8NG77 320 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 NT5CQ8TCD5 201 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 UTP15Q8TED0 518 aaKnown RBP23.31■■□□□ 1.32
TTC3-225ENST00000540756 ERVMER34-1Q9H9K5 563 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 STARD5Q9NSY2 213 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 ATAD3AQ9NVI7 634 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 FBXW2Q9UKT8 454 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 ASB4Q9Y574 426 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 PCDHB3Q9Y5E6 796 aa23.31■■□□□ 1.32
TTC3-225ENST00000540756 RP1P56715 2156 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 C1orf226A1L170 272 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 DNAJB6O75190 326 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 ALDH4A1P30038 563 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 CAPZBP47756 277 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 GFERP55789 205 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 STXBP1P61764 594 aaKnown RBP23.3■■□□□ 1.32
TTC3-225ENST00000540756 HEPACAMQ14CZ8 416 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 LRRC74BQ6ZQY2 392 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 CANT1Q8WVQ1 401 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 EXOSC8Q96B26 276 aaKnown RBP23.3■■□□□ 1.32
TTC3-225ENST00000540756 MTERF3Q96E29 417 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 MAP3K3Q99759 626 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 TMEM121BQ9BXQ6 578 aaPredicted RBP23.3■■□□□ 1.32
TTC3-225ENST00000540756 TRIM4Q9C037 500 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 SEMA6CQ9H3T2 930 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 STOML1Q9UBI4 398 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 ANGPTL2Q9UKU9 493 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 A0A1W2PR48 441 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 SLC9B1P1A6NJY1 282 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 SLC35G6P0C7Q6 338 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 GNSP15586 552 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 CDH3P22223 829 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 PPM1FP49593 454 aaPredicted RBP23.3■■□□□ 1.32
TTC3-225ENST00000540756 CASP9P55211 416 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 SLC9A5Q14940 896 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 GLYATQ6IB77 296 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 CALHM3Q86XJ0 350 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 GATAD2AQ86YP4 633 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 SLC35F3Q8IY50 421 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 LILRA2Q8N149 483 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 SH3GL1Q99961 368 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 ANKMY1Q9P2S6 941 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 LRIT1Q9P2V4 623 aa23.3■■□□□ 1.32
TTC3-225ENST00000540756 UNC13CQ8NB66 2214 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 LILRA5A6NI73 299 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 NTRK1P04629 796 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 RPL3P39023 403 aaKnown RBP23.29■■□□□ 1.32
TTC3-225ENST00000540756 RGS1Q08116 209 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 C6orf132Q5T0Z8 1188 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 C18orf63Q68DL7 685 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 MRM1Q6IN84 353 aaKnown RBP23.29■■□□□ 1.32
TTC3-225ENST00000540756 RNF44Q7L0R7 432 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 SDR16C5Q8N3Y7 309 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 AVL9Q8NBF6 648 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 COPS7BQ9H9Q2 264 aaPredicted RBP23.29■■□□□ 1.32
TTC3-225ENST00000540756 UCK1Q9HA47 277 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 TPT1P8Q9HAU6 139 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 ACSL6Q9UKU0 697 aa23.29■■□□□ 1.32
TTC3-225ENST00000540756 A0A1W2PRB8 838 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 EPN2O95208 641 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 HNRNPFP52597 415 aaKnown RBP23.28■■□□□ 1.32
TTC3-225ENST00000540756 DTWD2Q8NBA8 298 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms