RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TMEM233B4DJY2 109 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 KHNYNO15037 678 aaKnown RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 TLX2O43763 284 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CKMT2P17540 419 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CEBPGP53567 150 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 C14orf80Q86SX3 495 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF420Q8TAQ5 688 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OR2M4Q96R27 311 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OR51B5Q9H339 312 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 PLEKHA6Q9Y2H5 1048 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 PMF1-BGLAPU3KQ54 211 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 DISC1C4P0D8 188 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 RPP14O95059 124 aaKnown RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ITGB1P05556 798 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 PROZP22891 400 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 GRK5P34947 590 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CDKL1Q00532 357 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 LMAN2Q12907 356 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 GRIK2Q13002 908 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MAB21L1Q13394 359 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 NADK2Q4G0N4 442 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MAMDC4Q6UXC1 1216 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF367Q7RTV3 350 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 THAP6Q8TBB0 222 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 SHKBP1Q8TBC3 707 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 HSH2DQ96JZ2 352 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 DHRS1Q96LJ7 313 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ADAM7Q9H2U9 754 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 RNF13O43567 381 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 SLC19A2O60779 497 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 KDM4BO94953 1096 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OPN1SWP03999 348 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 RHOP08100 348 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 GDF5P43026 501 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CDKN1CP49918 316 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 NRLP54845 237 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MAD2L1BPQ15013 274 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ANO7Q6IWH7 933 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF517Q6ZMY9 492 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CTU1Q7Z7A3 348 aaKnown RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ASPGQ86U10 573 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 HS6ST2Q96MM7 605 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 RBP7Q96R05 134 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 P2RY13Q9BPV8 354 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 SLC30A2Q9BRI3 323 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 NAA11Q9BSU3 229 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MALT1Q9UDY8 824 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 PCDHB14Q9Y5E9 798 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 BLOC1S5-TXNDC5H3BN57 136 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MAN2B1O00754 1011 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MAFKO60675 156 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF623O75123 536 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 IL33O95760 270 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 FESP07332 822 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF84P51523 738 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ACTC1P68032 377 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ACTA1P68133 377 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MADCAM1Q13477 382 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 HSDL2Q6YN16 418 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 Q8N9G6 341 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZSCAN4Q8NAM6 433 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 GOLM1Q8NBJ4 401 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OR6N1Q8NGY5 312 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OR2L8Q8NGY9 312 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 C17orf62Q9BQA9 187 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 XYLT2Q9H1B5 865 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 NSUN3Q9H649 340 aaKnown RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 C8orf33Q9H7E9 229 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 B4GALT6Q9UBX8 382 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF69Q9UC07 566 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 WASF3Q9UPY6 502 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 KCNK6Q9Y257 313 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CDH10Q9Y6N8 788 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OXSR1O95747 527 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 HPRP00739 348 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 GSTT2P0CG29 244 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CD9P21926 228 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 SLC25A25Q6KCM7 469 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 PLEKHG7Q6ZR37 379 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 CYS1Q717R9 158 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 FCAMRQ8WWV6 532 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MMABQ96EY8 250 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-207ENST00000539563 TM9SF2Q99805 663 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 OR51I1Q9H343 314 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 MEAF6Q9HAF1 191 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 HRASLS2Q9NWW9 162 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 PLCL2Q9UPR0 1127 aa6.25□□□□□ -1.41
LSAMP-207ENST00000539563 FAAHO00519 579 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 EMC8O43402 210 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ARHGEF15O94989 841 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 AK1P00568 194 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CSN2P05814 226 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 GRIA2P42262 883 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 MECP2P51608 486 aaKnown RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 AP2S1P53680 142 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 IRF5Q13568 498 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 DGLUCYQ7Z3D6 616 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 UMODL1-AS1Q8N2C9 162 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 JAGN1Q8N5M9 183 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 AKAP1Q92667 903 aaKnown RBP eCLIP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms