RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 RBM48Q5RL73 367 aaKnown RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 GTF2IRD2BQ6EKJ0 949 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 WASH2PQ6VEQ5 465 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 R3HCC1LQ7Z5L2 792 aaKnown RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 GTF2IRD2Q86UP8 949 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 SYT12Q8IV01 421 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 PPM1MQ96MI6 270 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC6A18Q96N87 628 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 CSF3RQ99062 836 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 WASH6PQ9NQA3 447 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 PCOLCE2Q9UKZ9 415 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 TSC22D4Q9Y3Q8 395 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 COLEC10Q9Y6Z7 277 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 ACPPP15309 386 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 GSTM2P28161 218 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 MLLT10P55197 1068 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 MTPNP58546 118 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 EIF2B5Q13144 721 aaKnown RBP16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 ITGADQ13349 1161 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 FAM98BQ52LJ0 330 aaKnown RBP16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 ZNF362Q5T0B9 420 aaPredicted RBP16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 ARMCX6Q7L4S7 300 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 C8orf59Q8N0T1 100 aaPredicted RBP16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 KRT78Q8N1N4 520 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 ANKRD53Q8N9V6 530 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 ABHD11Q8NFV4 315 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 CDC26Q8NHZ8 85 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 SGCDQ92629 289 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 GTF2H4Q92759 462 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 MAGED4Q96JG8 741 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR52E6Q96RD3 313 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 TOR3AQ9H497 397 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 ERGIC3Q9Y282 383 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 HEBP2Q9Y5Z4 205 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 DGKBQ9Y6T7 804 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 LRP4O75096 1905 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 FANCMQ8IYD8 2048 aa16.32■□□□□ 0.2
PCDHB17P-201ENST00000539533 IGKV1-8A0A0C4DH67 115 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 SPTY2D1-AS1A0A0U1RR47 76 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 A6NCN8 305 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 TOR1BO14657 336 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 KCNH1O95259 989 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 B3GALT4O96024 378 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 TNFP01375 233 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 ANXA6P08133 673 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 IL7RP16871 459 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC19A1P41440 591 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 CCR8P51685 355 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PLA2G16P53816 162 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PRDX1Q06830 199 aaKnown RBP16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 MTAPQ13126 283 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 FZD2Q14332 565 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 MAPKAPK3Q16644 382 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 CCDC80Q76M96 950 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 SPARTQ8N0X7 666 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 UBE2E3Q969T4 207 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PELI2Q9HAT8 420 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 AASDHPPTQ9NRN7 309 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 SPHK1Q9NYA1 384 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 B3GNT3Q9Y2A9 372 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 AXIN1O15169 862 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 HPRP00739 348 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 GBAP04062 536 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 CELA2BP08218 269 aaPredicted RBP16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 F3P13726 295 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 CHRNB3Q05901 458 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PGS1Q32NB8 556 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PRR23BQ6ZRT6 265 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PLD3Q8IV08 490 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR4E2Q8NGC2 313 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 HDAC2Q92769 488 aaKnown RBP16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 METTL2AQ96IZ6 378 aaKnown RBP16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 AIF1LQ9BQI0 150 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 RAB11FIP5Q9BXF6 653 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 KIR3DX1Q9H7L2 352 aa16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 ARHGEF17Q96PE2 2063 aaPredicted RBP16.31■□□□□ 0.2
PCDHB17P-201ENST00000539533 PRICKLE3O43900 615 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 NDUFS2O75306 463 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 MYO1DO94832 1006 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 TBX6O95947 436 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 DCNP07585 359 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 ANXA4P09525 319 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 GGT1P19440 569 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 MAOBP27338 520 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PEBP1P30086 187 aaKnown RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PIK3CBP42338 1070 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 CYP4F2P78329 520 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 ILF3Q12906 894 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 SPIN4Q56A73 249 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 C10orf62Q5T681 223 aaPredicted RBP16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 TTC23Q5W5X9 447 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 ZDHHC13Q8IUH4 622 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 SFTPA2Q8IWL1 248 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 FAM9CQ8IZT9 166 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 SPEM1Q8N4L4 309 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PJA1Q8NG27 643 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR4K1Q8NGD4 311 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 PATE1Q8WXA2 126 aa16.3■□□□□ 0.2
PCDHB17P-201ENST00000539533 AURKBQ96GD4 344 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms