RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 ZDHHC11Q9H8X9 412 aa7.56□□□□□ -1.2
CD4-209ENST00000539492 ADAP2Q9NPF8 381 aa7.56□□□□□ -1.2
CD4-209ENST00000539492 PNO1Q9NRX1 252 aaKnown RBP7.56□□□□□ -1.2
CD4-209ENST00000539492 HPF1Q9NWY4 346 aa7.56□□□□□ -1.2
CD4-209ENST00000539492 ZNF223Q9UK11 482 aaPredicted RBP7.56□□□□□ -1.2
CD4-209ENST00000539492 CORO1CQ9ULV4 474 aaPredicted RBP7.56□□□□□ -1.2
CD4-209ENST00000539492 ERVK-11Q9UQG0 969 aa7.56□□□□□ -1.2
CD4-209ENST00000539492 CSPG4Q6UVK1 2322 aa7.56□□□□□ -1.2
CD4-209ENST00000539492 CTAGE15A4D2H0 777 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 OR14I1A6ND48 311 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 C4orf51C9J302 202 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 NPIPA2E9PIF3 369 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 NPIPA3F8WFD2 350 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 CLDN4O14493 209 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 BCKDKO14874 412 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 KLK8O60259 260 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 DIAPH2O60879 1101 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 PDE9AO76083 593 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 ZWINTO95229 277 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 GUCA1CO95843 209 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 AHSGP02765 367 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 CCDC175P0C221 793 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 ACVR2AP27037 513 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 DNAJA1P31689 397 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 GPR143P51810 404 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 HSD17B7P56937 341 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 RAB38P57729 211 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 PPIAP62937 165 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 BTN3A2P78410 334 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 PLGLB1Q02325 96 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 FOLH1Q04609 750 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 PMPCAQ10713 525 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 MYBPHQ13203 477 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 RBBP5Q15291 538 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 CYP1B1Q16678 543 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 SPANXN3Q5MJ09 141 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 RNASEH2BQ5TBB1 312 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 HECTD2Q5U5R9 776 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 CCDC137Q6PK04 289 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 SBSNQ6UWP8 590 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 GK5Q6ZS86 529 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 CTAGE6Q86UF2 777 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 SLC22A16Q86VW1 577 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 THOC6Q86W42 341 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 PPIL6Q8IXY8 311 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 RASGEF1CQ8N431 466 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 MYRIPQ8NFW9 859 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 TTLQ8NG68 377 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 OR2M7Q8NG81 312 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 GRK7Q8WTQ7 553 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 NINJ1Q92982 152 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 PDLIM5Q96HC4 596 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 FAR2Q96K12 515 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 SMC6Q96SB8 1091 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 NAP1L3Q99457 506 aaPredicted RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 NAT9Q9BTE0 207 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 TMUB1Q9BVT8 246 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 NPLQ9BXD5 320 aaPredicted RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 TTTY12Q9BZ98 90 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 AICDAQ9GZX7 198 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 DEFB127Q9H1M4 99 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 PRTFDC1Q9NRG1 225 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 DEPPQ9NTK1 212 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 KCMF1Q9P0J7 381 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 MRPS33Q9Y291 106 aaKnown RBP7.55□□□□□ -1.2
CD4-209ENST00000539492 VWA7Q9Y334 891 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 CLDN16Q9Y5I7 305 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 KCNE2Q9Y6J6 123 aa7.55□□□□□ -1.2
CD4-209ENST00000539492 HRNRQ86YZ3 2850 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 KIAA1549Q9HCM3 1950 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 A0A088AWK7 358 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 A0A0G2JMM0 328 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 A0A1W2PPB8 328 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 A0A1W2PRS3 328 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 FAM221AA4D161 298 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 PINLYPA6NC86 204 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 TMEM200CA6NKL6 621 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 FAM166BA8MTA8 275 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 KIR3DP1A8MWS1 328 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 TGFBR3LH3BV60 316 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 ERI3O43414 337 aaKnown RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 B3GALT2O43825 422 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 PRKNO60260 465 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 OR2J2O76002 312 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 GLSO94925 669 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 OR6B1O95007 311 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 NADKO95544 446 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 IGHG3P01860 377 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 CD99P14209 185 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 ZNF10P21506 573 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 GSTM2P28161 218 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 PPP2R1BP30154 601 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 HPDP32754 393 aaPredicted RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 ZFP36L2P47974 494 aaKnown RBP7.54□□□□□ -1.2
CD4-209ENST00000539492 FNTAP49354 379 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 IST1P53990 364 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 CCZ1BP86790 482 aa7.54□□□□□ -1.2
CD4-209ENST00000539492 CCZ1P86791 482 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms