RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SPINK2P20155 84 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 NUDT2P50583 147 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 RGS1Q08116 209 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 TBL3Q12788 808 aaKnown RBP16.35■□□□□ 0.21
CLN6-202ENST00000538696 PTGR1Q14914 329 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 ADPRMQ3LIE5 342 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 TMEM214Q6NUQ4 689 aaKnown RBP16.35■□□□□ 0.21
CLN6-202ENST00000538696 BLOC1S3Q6QNY0 202 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 CLHC1Q8NHS4 586 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 ZCCHC10Q8TBK6 192 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 SLC25A23Q9BV35 468 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 EBPLQ9BY08 206 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 KLHL31Q9H511 634 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 PPT2Q9UMR5 302 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 PCDHGA3Q9Y5H0 932 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 HYKKA2RU49 373 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 FAM234BA2RU67 622 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 ZNF749O43361 778 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 SLC22A3O75751 556 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 TNFSF15O95150 251 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 ZNF28P17035 718 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 SDC1P18827 310 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 MAPK1P28482 360 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 DNAL1Q4LDG9 190 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 DCAF12Q5T6F0 453 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 RIPOR1Q6ZS17 1223 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 RETREG3Q86VR2 466 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 TMEM126BQ8IUX1 230 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 DTWD1Q8N5C7 304 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 C1orf52Q8N6N3 182 aaKnown RBP16.34■□□□□ 0.21
CLN6-202ENST00000538696 PROKR1Q8TCW9 393 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 NUDT8Q8WV74 236 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 MS4A6EQ96DS6 147 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 RAB3IPQ96QF0 476 aaPredicted RBP16.34■□□□□ 0.21
CLN6-202ENST00000538696 F2RL3Q96RI0 385 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 SCNM1Q9BWG6 230 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 MRPL1Q9BYD6 325 aaKnown RBP16.34■□□□□ 0.21
CLN6-202ENST00000538696 NRSN2Q9GZP1 204 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 C1orf21Q9H246 121 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 OR51B5Q9H339 312 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 SLC52A3Q9NQ40 469 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 CUTCQ9NTM9 273 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 FOXJ2Q9P0K8 574 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 BAIAP2L1Q9UHR4 511 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 TMED5Q9Y3A6 229 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 PCDHB3Q9Y5E6 796 aa16.34■□□□□ 0.21
CLN6-202ENST00000538696 LRIT2A6NDA9 550 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 MRASO14807 208 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 ZNF888P0CJ79 500 aaPredicted RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 PRPS2P11908 318 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 ACPPP15309 386 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 JAK1P23458 1154 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 TACR1P25103 407 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 POLR2JP52435 117 aaKnown RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 EMP3P54852 163 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 STXBP1P61764 594 aaKnown RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 RAE1P78406 368 aaKnown RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 ACSM2AQ08AH3 577 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 STX5Q13190 355 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 RCAN2Q14206 197 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 VPS26BQ4G0F5 336 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 MANEAQ5SRI9 462 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 GARNL3Q5VVW2 1013 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 KHDRBS2Q5VWX1 349 aaKnown RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 ACSM2BQ68CK6 577 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 NOXRED1Q6NXP6 359 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 DSELQ8IZU8 1212 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 KRTCAP2Q8N6L1 136 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 UTP15Q8TED0 518 aaKnown RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 CHTF18Q8WVB6 975 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 GAL3ST3Q96A11 431 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 SPDL1Q96EA4 605 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 TSSK3Q96PN8 268 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 TEFMQ96QE5 360 aaKnown RBP16.33■□□□□ 0.2
CLN6-202ENST00000538696 SERPINI1Q99574 410 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 ZPBPQ9BS86 351 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 DPY30Q9C005 99 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 TMEM45AQ9NWC5 275 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 SRPK3Q9UPE1 567 aa16.33■□□□□ 0.2
CLN6-202ENST00000538696 ASPDHA6ND91 283 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 BBIP1A8MTZ0 92 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 SAP18O00422 153 aaKnown RBP16.32■□□□□ 0.2
CLN6-202ENST00000538696 B3GALT4O96024 378 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 ADRB1P08588 477 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 SMIM10L1P0DMW3 83 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 TIA1P31483 386 aaKnown RBP eCLIP16.32■□□□□ 0.21e-5■■■□□ 19.1
CLN6-202ENST00000538696 PGM1P36871 562 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 KCNK10P57789 538 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 RAB8AP61006 207 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 RTP5Q14D33 572 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 MMEL1Q495T6 779 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 TIGD2Q4W5G0 525 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 DEPDC1Q5TB30 811 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 YOD1Q5VVQ6 348 aaPredicted RBP16.32■□□□□ 0.2
CLN6-202ENST00000538696 IGF2-ASQ6U949 168 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 PRSS41Q7RTY9 318 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 UBE3DQ7Z6J8 389 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 PARP9Q8IXQ6 854 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 DEFB107AQ8IZN7 70 aa16.32■□□□□ 0.2
CLN6-202ENST00000538696 SLC38A9Q8NBW4 561 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms