RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EFCAB11Q9BUY7 163 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 C1QTNF3Q9BXJ4 246 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 REXO4Q9GZR2 422 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 NOL11Q9H8H0 719 aaKnown RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 IPPKQ9H8X2 491 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 DMRT3Q9NQL9 472 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 PLA2G3Q9NZ20 509 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.89□□□□□ -1.15
SPARC-208ENST00000538026 TBK1Q9UHD2 729 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 HEMK1Q9Y5R4 338 aaPredicted RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 V9GYY5 206 aaPredicted RBP7.89□□□□□ -1.15
SPARC-208ENST00000538026 NAV2Q8IVL1 2488 aa7.89□□□□□ -1.15
SPARC-208ENST00000538026 DNAJC13O75165 2243 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 ZNF407Q9C0G0 2248 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 TCRBV16S1A1N1A0A5B0 115 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 CLEC18AA5D8T8 446 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 ANKDD1BA6NHY2 528 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 MAGEB17A8MXT2 336 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 G3V2L1 256 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 H0YIV9 168 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 STX16-NPEPL1H3BU86 382 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 PLPP1O14494 284 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 STX16O14662 325 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 EEDO75530 441 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 SCELO95171 688 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 F10P00742 488 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 S100BP04271 92 aaPredicted RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 CYC1P08574 325 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 RBP1P09455 135 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 IL10P22301 178 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 GSTM2P28161 218 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 BSGP35613 385 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 SLCO1A2P46721 670 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 GPR143P51810 404 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 CDH13P55290 713 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 STXBP1P61764 594 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 RPS13P62277 151 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 SRSF11Q05519 484 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 MFAP5Q13361 173 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 LAPTM5Q13571 262 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 NSDHLQ15738 373 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 SFT2D3Q587I9 215 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 ZNF468Q5VIY5 522 aaPredicted RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 LIPJQ5W064 366 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 FCRLBQ6BAA4 426 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 PLAG1Q6DJT9 500 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 LETMD1Q6P1Q0 360 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 MED27Q6P2C8 311 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 CLEC18BQ6UXF7 455 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 QSOX2Q6ZRP7 698 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 TDRPQ86YL5 185 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 KBTBD2Q8IY47 623 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 KIF2BQ8N4N8 673 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 TBC1D19Q8N5T2 526 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 ACOT4Q8N9L9 421 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 CLEC18CQ8NCF0 446 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 TTLQ8NG68 377 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 OR2W6PQ8NHA6 318 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 EPS8L3Q8TE67 593 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 ZNF483Q8TF39 744 aaPredicted RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 AENQ8WTP8 325 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 CCT6BQ92526 530 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 PNPLA2Q96AD5 504 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 PTCHD1Q96NR3 888 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 LMF1Q96S06 567 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 MTERF1Q99551 399 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 NTMT1Q9BV86 223 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 MRPL46Q9H2W6 279 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 CLK4Q9HAZ1 481 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 FARSBQ9NSD9 589 aaKnown RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 PTGFRNQ9P2B2 879 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 PSMC3IPQ9P2W1 217 aaPredicted RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 ZNF223Q9UK11 482 aaPredicted RBP7.88□□□□□ -1.15
SPARC-208ENST00000538026 DAPP1Q9UN19 280 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 TSC22D4Q9Y3Q8 395 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 PCDHGA10Q9Y5H3 936 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 MAST4O15021 2626 aa7.88□□□□□ -1.15
SPARC-208ENST00000538026 NINQ8N4C6 2090 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 TMEM200CA6NKL6 621 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 A8MUA0 341 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 ESPNB1AK53 854 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 TMPRSS11DO60235 418 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 PRKNO60260 465 aaPredicted RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 PRMT3O60678 531 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 DPM1O60762 260 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 PRKRAO75569 313 aaKnown RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 WDPCPO95876 746 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 PCNAP12004 261 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 RNH1P13489 461 aaKnown RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 HIST1H1TP22492 207 aaPredicted RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 PIK3CBP42338 1070 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 UQCRFS1P47985 274 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 HNRNPH2P55795 449 aaKnown RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 RAB38P57729 211 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 SLC26A5P58743 744 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 ZRSR2Q15696 482 aaKnown RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 INPP5JQ15735 1006 aaPredicted RBP7.87□□□□□ -1.15
SPARC-208ENST00000538026 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
SPARC-208ENST00000538026 ERCC6LQ2NKX8 1250 aa7.87□□□□□ -1.15
SPARC-208ENST00000538026 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms