RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 A0A087X1B8 175 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 MYOCOSA0A1B0GUC4 107 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 TCRBV16S1A1N1A0A5B0 115 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 SAGE2PA6NJ88 616 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 CLDN4O14493 209 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 LRRTM2O43300 516 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 KERAO60938 352 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 MYO1DO94832 1006 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 ACSL3O95573 720 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 LDLRP01130 860 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 CRYABP02511 175 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 C2P06681 752 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 GFAPP14136 432 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 CD46P15529 392 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 CD22P20273 847 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 GSTM2P28161 218 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 HPDP32754 393 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 CD96P40200 585 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 HNRNPFP52597 415 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 RAB38P57729 211 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 TGM3Q08188 693 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 LAPTM5Q13571 262 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 DDX39BQ13838 428 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 OR1C1Q15619 314 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 INAQ16352 499 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 FAM83EQ2M2I3 478 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 UBAP2Q5T6F2 1119 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 H3F3CQ6NXT2 135 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 RPS19BP1Q86WX3 136 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 TEX9Q8N6V9 391 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 NOA1Q8NC60 698 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 OR2L5Q8NG80 312 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 THAP3Q8WTV1 239 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 SERINC2Q96SA4 455 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 ATOH8Q96SQ7 321 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 DEFB126Q9BYW3 111 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 VPS11Q9H270 941 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 EHD1Q9H4M9 534 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 SNX15Q9NRS6 342 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 CPSF2Q9P2I0 782 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 MRPS33Q9Y291 106 aaKnown RBP9.78□□□□□ -0.84
CAPN1-225ENST00000533704 MMACHCQ9Y4U1 282 aa9.78□□□□□ -0.84
CAPN1-225ENST00000533704 A0A096LPK6 155 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 IGKV3D-11A0A0A0MRZ8 115 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TRBV11-1A0A0K0K1C0 115 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SYCE1LA8MT33 242 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 K7EPI3 171 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SAP18O00422 153 aaKnown RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 RTCAO00442 366 aaKnown RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 UNC5CO95185 931 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TBX6O95947 436 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TGFB1P01137 390 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 IFNA16P05015 189 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CTAGE8P0CG41 777 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 EPORP19235 508 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 MST1P26927 711 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 COL8A1P27658 744 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TYK2P29597 1187 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 PPP2R1BP30154 601 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SERPINB8P50452 374 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TDGF1P3P51864 188 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 MTTPP55157 894 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 LIM2P55344 173 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 PER3P56645 1201 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 PFKFB4Q16877 469 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 C1QL3Q5VWW1 255 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SPINK14Q6IE38 97 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 MED27Q6P2C8 311 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 KLC3Q6P597 504 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 ABHD17CQ6PCB6 329 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CEP128Q6ZU80 1094 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 FJX1Q86VR8 437 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CTAGE4Q8IX94 777 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CENPLQ8N0S6 344 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 MDS2Q8NDY4 140 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TMEM52Q8NDY8 209 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 MNS1Q8NEH6 495 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 UHMK1Q8TAS1 419 aaKnown RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 ELP5Q8TE02 316 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 WDR34Q96EX3 536 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SEC16BQ96JE7 1060 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 QRFPRQ96P65 431 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CSF3RQ99062 836 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 NPLQ9BXD5 320 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TSPAN10Q9H1Z9 355 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CDC42EP4Q9H3Q1 356 aaKnown RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 LRFN1Q9P244 771 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SEC14L3Q9UDX4 400 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 DMGDHQ9UI17 866 aaKnown RBP9.77□□□□□ -0.85
CAPN1-225ENST00000533704 SH3BGRL2Q9UJC5 107 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 FBXW2Q9UKT8 454 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 CENPEQ02224 2701 aa9.77□□□□□ -0.85
CAPN1-225ENST00000533704 TRGV8A0A0C4DH27 118 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 HMX2A2RU54 273 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 LRRC14BA6NHZ5 514 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 POC1B-GALNT4F8VUJ3 575 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 TGFBR3LH3BV60 316 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 INHBAP08476 426 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 EPB42P16452 691 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms