RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MTTPP55157 894 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 EIF2S3LQ2VIR3 472 aaKnown RBP28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 ACER2Q5QJU3 275 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 FCRLBQ6BAA4 426 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 ADAMTS18Q8TE60 1221 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 GRHL3Q8TE85 626 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 ZNF473Q8WTR7 871 aaKnown RBP28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 DCAKDQ8WVC6 231 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 COPS7BQ9H9Q2 264 aaPredicted RBP28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 DOPEY2Q9Y3R5 2298 aa28.41■■■□□ 2.14
SSSCA1-207ENST00000533115 OR5H15A6NDH6 313 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 PCNAP12004 261 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 CNTFP26441 200 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 TECRLQ5HYJ1 363 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 GRHL2Q6ISB3 625 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 OR7G3Q8NG95 312 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 KCNC2Q96PR1 638 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 MS4A8Q9BY19 250 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 PRM3Q9NNZ6 103 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 PRDM7Q9NQW5 492 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 ZNF358Q9NW07 568 aa28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 CPSF2Q9P2I0 782 aaKnown RBP28.4■■■□□ 2.14
SSSCA1-207ENST00000533115 CERS1P27544 350 aa28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 SERPINB1P30740 379 aa28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 PCBP2Q15366 365 aaKnown RBP eCLIP28.39■■■□□ 2.142e-13■■□□□ 14.2
SSSCA1-207ENST00000533115 MEP1AQ16819 746 aa28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 CRLF3Q8IUI8 442 aa28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 SRFBP1Q8NEF9 429 aaKnown RBP28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 ELP5Q8TE02 316 aa28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 ROGDIQ9GZN7 287 aa28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 TNPO3Q9Y5L0 923 aaKnown RBP28.39■■■□□ 2.14
SSSCA1-207ENST00000533115 ANKUB1A6NFN9 424 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 LRRC14BA6NHZ5 514 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 SAGE2PA6NJ88 616 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 CLDN4O14493 209 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 RBP1P09455 135 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 RHOXF2BP0C7M4 288 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 LIM2P55344 173 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 HSD17B7P56937 341 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 FAM180AQ6UWF9 173 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 UBE3DQ7Z6J8 389 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 SCUBE1Q8IWY4 988 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 BEST3Q8N1M1 668 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 SUN3Q8TAQ9 357 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 PRR7Q8TB68 274 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 FAR1Q8WVX9 515 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 NPAS2Q99743 824 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 RHOXF2Q9BQY4 288 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 PRTFDC1Q9NRG1 225 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 ABI3Q9P2A4 366 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 DAPP1Q9UN19 280 aa28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 MRPS33Q9Y291 106 aaKnown RBP28.38■■■□□ 2.13
SSSCA1-207ENST00000533115 TRIM49D1C9J1S8 452 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 AGFG2O95081 481 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 ABHD2P08910 425 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 COL6A2P12110 1019 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 TAS2R50P59544 299 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 GTF2H2Q13888 395 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 INAQ16352 499 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 TMEM35AQ53FP2 167 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 LIPJQ5W064 366 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 GTF2H2CQ6P1K8 395 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 METTL2BQ6P1Q9 378 aaKnown RBP28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 CHSY3Q70JA7 882 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 TRMT10CQ7L0Y3 403 aaKnown RBP28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 ZNF595Q8IYB9 648 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 SLC5A8Q8N695 610 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 FAM47BQ8NA70 645 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 TMEM52Q8NDY8 209 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 CMTM7Q96FZ5 175 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 TBCDQ9BTW9 1192 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 ACTR8Q9H981 624 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 ADGRE2Q9UHX3 823 aa28.37■■■□□ 2.13
SSSCA1-207ENST00000533115 EXOC1LA0A1B0GW35 172 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 A8MUA0 341 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 TGFB1P01137 390 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 MYBL2P10244 700 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 HNRNPFP52597 415 aaKnown RBP28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 ELOAQ14241 798 aaKnown RBP28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 RCN2Q14257 317 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 TSNAXIP1Q2TAA8 658 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 GOLGA7Q7Z5G4 137 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 MYLK4Q86YV6 388 aaPredicted RBP28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 KIF2BQ8N4N8 673 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 ST6GALNAC3Q8NDV1 305 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 NFAM1Q8NET5 270 aaPredicted RBP28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 SCYL1Q96KG9 808 aa28.36■■■□□ 2.13
SSSCA1-207ENST00000533115 CYR61O00622 381 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 E2F3O00716 465 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 MAN1A2O60476 641 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 PRAMEF2O60811 474 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 SH3BGRLO75368 114 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 SIX3O95343 332 aaPredicted RBP28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 PIK3CGP48736 1102 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 SLC13A2Q13183 592 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 ZNF793Q6ZN11 406 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 LGI4Q8N135 537 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 BCORP1Q8N888 145 aa28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 PTGR2Q8N8N7 351 aaPredicted RBP28.35■■■□□ 2.13
SSSCA1-207ENST00000533115 CSF3RQ99062 836 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms