RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 GTF2A1P52655 376 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SOX8P57073 446 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CORO7P57737 925 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 RPS15AP62244 130 aaKnown RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CDKL1Q00532 357 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 MEF2AQ02078 507 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 RUNX1T1Q06455 604 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 FAM53BQ14153 422 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 USP10Q14694 798 aaKnown RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 EFTUD2Q15029 972 aaKnown RBP eCLIP7.99□□□□□ -1.131e-8■■■■□ 20
SSBP3-212ENST00000528930 PCOLCEQ15113 449 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 C18orf21Q32NC0 220 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CATSPEREQ5SY80 951 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 UBAP2Q5T6F2 1119 aaKnown RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 HDXQ7Z353 690 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 RELL1Q8IUW5 271 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CTAGE3PQ8IX95 158 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SHISA5Q8N114 240 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SPATA6LQ8N4H0 392 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 PPM1NQ8N819 430 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 STT3BQ8TCJ2 826 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 ATL1Q8WXF7 558 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 TMEM158Q8WZ71 300 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 RERGQ96A58 199 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 NACC2Q96BF6 587 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 RHBDF1Q96CC6 855 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 MVB12AQ96EY5 273 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CABS1Q96KC9 395 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 IP6K3Q96PC2 410 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 MACROD1Q9BQ69 325 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 HAUS8Q9BT25 410 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 DERL2Q9GZP9 239 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SPNS1Q9H2V7 528 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-212ENST00000528930 P4HTMQ9NXG6 502 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 TXNDC16Q9P2K2 825 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 CTNNAL1Q9UBT7 734 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 SLC22A14Q9Y267 594 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 ZNF281Q9Y2X9 895 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 OARD1Q9Y530 152 aa7.99□□□□□ -1.13
SSBP3-212ENST00000528930 A0A087WUV0 522 aaPredicted RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 A0A0A6YYC8 382 aaPredicted RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 HMX2A2RU54 273 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CTAGE15A4D2H0 777 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 ERICH4A6NGS2 130 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 INAFM1C9JVW0 142 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 I3L1I5 382 aaPredicted RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 AGPSO00116 658 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 FFAR3O14843 346 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 PCDH17O14917 1159 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 GPR42O15529 346 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 TAPBPO15533 448 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 JRKO75564 520 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 ANXA5P08758 320 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 ZGLP1P0C6A0 271 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CTAGE8P0CG41 777 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CCDC166P0CW27 439 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 STMN1P16949 149 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 FBLP22087 321 aaKnown RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 STX2P32856 288 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 TSFMP43897 325 aaKnown RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 SLC6A12P48065 614 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 KCNC1P48547 511 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CCR8P51685 355 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 EFNA3P52797 238 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 SLC12A2P55011 1212 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 RRADP55042 308 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 RAB10P61026 200 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 RAC1P63000 192 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 KLC1Q07866 573 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 DLG1Q12959 904 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 NAB1Q13506 487 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 TGFBIQ15582 683 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 OR4D1Q15615 310 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 GLE1Q53GS7 698 aaKnown RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 KIRREL2Q6UWL6 708 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 SHISA6Q6ZSJ9 500 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CMC1Q7Z7K0 106 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 ADAMTSL2Q86TH1 951 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CTAGE6Q86UF2 777 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 THOC6Q86W42 341 aaKnown RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CTAGE4Q8IX94 777 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 KLHDC8AQ8IYD2 350 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 DEPDC4Q8N2C3 294 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 CEP112Q8N8E3 955 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 AMER3Q8N944 861 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 MFSD9Q8NBP5 474 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 KCT2Q8NC54 265 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 ZNF740Q8NDX6 193 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 SLC13A3Q8WWT9 602 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 SLC5A11Q8WWX8 675 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 NEIL2Q969S2 332 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 MBD6Q96DN6 1003 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 MMABQ96EY8 250 aaPredicted RBP7.98□□□□□ -1.13
SSBP3-212ENST00000528930 TSPAN17Q96FV3 270 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 FER1L6-AS2Q96M78 137 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 MESP1Q9BRJ9 268 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 FAM129AQ9BZQ8 928 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 TGIF2Q9GZN2 237 aa7.98□□□□□ -1.13
SSBP3-212ENST00000528930 DRC3Q9H069 523 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms