RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM214AQ32MH5 1076 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT3A2Q3SY77 523 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 IRAK1BP1Q5VVH5 260 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 WSCD1Q658N2 575 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 JADE1Q6IE81 842 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SLC27A4Q6P1M0 643 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 CCDC137Q6PK04 289 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PRSS55Q6UWB4 352 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 FAM83HQ6ZRV2 1179 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 LINC00696Q6ZRV3 163 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ZBTB49Q6ZSB9 765 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 NDUFAF7Q7L592 441 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ISCA2Q86U28 154 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ATCAYQ86WG3 371 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PDSS2Q86YH6 399 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 RBFAQ8N0V3 343 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 CLIP4Q8N3C7 705 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SVOPLQ8N434 492 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MINDY1Q8N5J2 469 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MEIOBQ8N635 442 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 WDSUB1Q8N9V3 476 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ACBD4Q8NC06 268 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 GLMPQ8WWB7 406 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UTP4Q969X6 686 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SIPA1Q96FS4 1042 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 FAM210BQ96KR6 192 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 C12orf66Q96MD2 445 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ZSWIM3Q96MP5 696 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 BTBD10Q9BSF8 475 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ITPAQ9BY32 194 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 OSBPL8Q9BZF1 889 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SEMA4CQ9C0C4 833 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 GPR88Q9GZN0 384 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SHARPINQ9H0F6 387 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 DDX31Q9H8H2 851 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT1A7Q9HAW7 530 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT1A10Q9HAW8 530 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT1A8Q9HAW9 530 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MAGEF1Q9HAY2 307 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 EQTNQ9NQ60 294 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SAR1AQ9NR31 198 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF701Q9NV72 531 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 NDUFAF4Q9P032 175 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 VAPAQ9P0L0 249 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 H2AFY2Q9P0M6 372 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MIOXQ9UGB7 285 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 TMPRSS11EQ9UL52 423 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ATXN7L1Q9ULK2 861 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PCDHB8Q9UN66 801 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MAGED2Q9UNF1 606 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 GPR55Q9Y2T6 319 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT2A1Q9Y4X1 527 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 POLR3HQ9Y535 204 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PCDHB1Q9Y5F3 818 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PCDHGB2Q9Y5G2 931 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PCDHGA5Q9Y5G8 931 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 TSC2P49815 1807 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 NUP210Q8TEM1 1887 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 FANCMQ8IYD8 2048 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NOTCH4Q99466 2003 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 A0A0A6YYK5 440 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 FAM230AA0A1W2PPH8 454 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 HACD1B0YJ81 288 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 C22orf46C9J442 243 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 PROB1E7EW31 1015 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 H7C2Y5 167 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 M0QZQ0 153 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 VNN2O95498 520 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 AHSGP02765 367 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC35E2BP0CK96 405 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC35E2P0CK97 266 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 CXCL8P10145 99 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF26P17031 533 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NDUFB7P17568 137 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NAA10P41227 235 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 PNPLA4P41247 253 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NR4A2P43354 598 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 HSF2Q03933 536 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 BNIP2Q12982 314 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 GRIK2Q13002 908 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 TSTA3Q13630 321 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 HTR4Q13639 388 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 VEZF1Q14119 521 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SURF1Q15526 300 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 TAB1Q15750 504 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC18A3Q16572 532 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ZBED5Q49AG3 693 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 GPR33Q49SQ1 333 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 RRAGBQ5VZM2 374 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 C18orf63Q68DL7 685 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ACAD10Q6JQN1 1059 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC25A25Q6KCM7 469 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF544Q6NX49 715 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 ZC3H14Q6PJT7 736 aaKnown RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 SLC22A25Q6T423 547 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 NUDT18Q6ZVK8 323 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 TMPRSS11FQ6ZWK6 438 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 CENPUQ71F23 418 aa7.23□□□□□ -1.25
HDAC3-216ENST00000523088 GRASPQ7Z6J2 395 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-216ENST00000523088 GPR180Q86V85 440 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms