RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ITGAXP20702 1163 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 CD82P27701 267 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 MAPK1P28482 360 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 SLC5A2P31639 672 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 GSTM5P46439 218 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 ARFIP2P53365 341 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 TRA2BP62995 288 aaKnown RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 ERVK-8P63133 956 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 DCDP81605 110 aaKnown RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 SLAMF1Q13291 335 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 RUNX2Q13950 521 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 DSG2Q14126 1118 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 SLC9A5Q14940 896 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 LSM12Q3MHD2 195 aaKnown RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 MRM1Q6IN84 353 aaKnown RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 CYP20A1Q6UW02 462 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 SPATA19Q7Z5L4 167 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 DSELQ8IZU8 1212 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 METTL27Q8N6F8 245 aaPredicted RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 RNF31Q96EP0 1072 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 ELAC2Q9BQ52 826 aaKnown RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 ASCL3Q9NQ33 180 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 LYARQ9NX58 379 aaKnown RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 ASIC5Q9NY37 505 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 POLR3HQ9Y535 204 aaPredicted RBP16.85■□□□□ 0.29
SDC2-205ENST00000520233 MAU2Q9Y6X3 613 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 DMXL1Q9Y485 3027 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 TRABD2BA6NFA1 517 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 ZNF860A6NHJ4 632 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 TMPRSS11DO60235 418 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 GBAP04062 536 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 ANXA4P09525 319 aaPredicted RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 FAM58BPP0C7Q3 252 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 PIM1P11309 404 aaPredicted RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 AGXTP21549 392 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 FBLP22087 321 aaKnown RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 OR1D4P47884 311 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 MAPK12P53778 367 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 MAP7Q14244 749 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 NKAIN1Q4KMZ8 207 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 IL23RQ5VWK5 629 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 C6orf15Q6UXA7 325 aaPredicted RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 SPATA21Q7Z572 469 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 CA13Q8N1Q1 262 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 GALNT6Q8NCL4 622 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 COL26A1Q96A83 441 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 NXPE2Q96DL1 559 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 RILPQ96NA2 401 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 EBPLQ9BY08 206 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 LYRM4Q9HD34 91 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 NOP53Q9NZM5 478 aaKnown RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 EIF3LQ9Y262 564 aaKnown RBP16.84■□□□□ 0.29
SDC2-205ENST00000520233 DLGAP4Q9Y2H0 992 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 MSRB2Q9Y3D2 182 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 MAP4K5Q9Y4K4 846 aa16.84■□□□□ 0.29
SDC2-205ENST00000520233 GNG14A0A1W2PPG7 69 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 CHST10O43529 356 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 SNX3O60493 162 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 DNAJB6O75190 326 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 PRPS2P11908 318 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 SPINK2P20155 84 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 LIM2P55344 173 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 RAB38P57729 211 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 OLR1P78380 273 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 SF3A3Q12874 501 aaKnown RBP eCLIP16.83■□□□□ 0.28
SDC2-205ENST00000520233 ARHGAP40Q5TG30 622 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 ZNF517Q6ZMY9 492 aaPredicted RBP16.83■□□□□ 0.28
SDC2-205ENST00000520233 OR5T3Q8NGG3 340 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 C10orf82Q8WW14 230 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 CCT8L2Q96SF2 557 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 MAPKAP1Q9BPZ7 522 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 C1orf50Q9BV19 199 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 SLC22A11Q9NSA0 550 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 MS4A12Q9NXJ0 267 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 KCMF1Q9P0J7 381 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 HCN3Q9P1Z3 774 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 PHF11Q9UIL8 331 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 FBXW2Q9UKT8 454 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 ACSL6Q9UKU0 697 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 DAPP1Q9UN19 280 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 ASB4Q9Y574 426 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 AK5Q9Y6K8 562 aa16.83■□□□□ 0.28
SDC2-205ENST00000520233 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.82■□□□□ 0.28
SDC2-205ENST00000520233 BRINP1O60477 761 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 GUCY1B2O75343 617 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 FAM107AO95990 144 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 ADRB1P08588 477 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 CCNYL3P0C7X3 344 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 BCKDHAP12694 445 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 PCSK2P16519 638 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 SDC1P18827 310 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 HNRNPH2P55795 449 aaKnown RBP16.82■□□□□ 0.28
SDC2-205ENST00000520233 MAT1AQ00266 395 aaKnown RBP16.82■□□□□ 0.28
SDC2-205ENST00000520233 ZNF763Q0D2J5 394 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 TIPARPQ7Z3E1 657 aaKnown RBP16.82■□□□□ 0.28
SDC2-205ENST00000520233 PIGWQ7Z7B1 504 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 GPR180Q86V85 440 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 ESX1Q8N693 406 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 OR51Q1Q8NH59 317 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms