RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 FRMPD2BQ6IN97 320 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZCCHC8Q6NZY4 707 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 AAGABQ6PD74 315 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZNF793Q6ZN11 406 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZNF621Q6ZSS3 439 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 FAM92BQ6ZTR7 304 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ABHD13Q7L211 337 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SPATA24Q86W54 205 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 DHFR2Q86XF0 187 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TICAM1Q8IUC6 712 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MSRB3Q8IXL7 192 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CLECL1Q8IZS7 167 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ENDOVQ8N8Q3 282 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 AMER3Q8N944 861 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ACOT4Q8N9L9 421 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 C19orf47Q8N9M1 422 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 FAM47BQ8NA70 645 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 KCT2Q8NC54 265 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZBTB44Q8NCP5 570 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 HIPK4Q8NE63 616 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TNIP2Q8NFZ5 429 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 OR8K5Q8NH50 307 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZCCHC10Q8TBK6 192 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 UTP15Q8TED0 518 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NCSTNQ92542 709 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MIEF2Q96C03 454 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZDHHC12Q96GR4 267 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZNF764Q96H86 408 aaPredicted RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 AHCYL2Q96HN2 611 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LRGUKQ96M69 825 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CCDC115Q96NT0 180 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TGM7Q96PF1 710 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CD180Q99467 661 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MAP3K3Q99759 626 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CCDC3Q9BQI4 270 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CPPED1Q9BRF8 314 aaPredicted RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NLNQ9BYT8 704 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ROGDIQ9GZN7 287 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 RAB33BQ9H082 229 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZMYND15Q9H091 742 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PCDHAC1Q9H158 963 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LYARQ9NX58 379 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TEX10Q9NXF1 929 aaPredicted RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC25A37Q9NYZ2 338 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NLGN3Q9NZ94 848 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GMPR2Q9P2T1 348 aaKnown RBP7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EPHA6Q9UF33 1036 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 VPS4AQ9UN37 437 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC6A14Q9UN76 642 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NEUROG3Q9Y4Z2 214 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PCDHB14Q9Y5E9 798 aa7.26□□□□□ -1.25
SCARNA20.1-201ENST00000516009 UNC13CQ8NB66 2214 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SCN2AQ99250 2005 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 RP1P56715 2156 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 IGHV1OR21-1A0A087WYE8 117 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LOC105369274A0A096LPK9 316 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LOC102723532A0A0G2JNH3 316 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 A0A1W2PRB8 838 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 C1orf226A1L170 272 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CLIC1O00299 241 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TXNDC9O14530 226 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PDPK1O15530 556 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 P2RX6O15547 441 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 DUX1O43812 170 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 B3GALT2O43825 422 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GMNNO75496 209 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EPN2O95208 641 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CER1O95813 267 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ABCB1P08183 1280 aaPredicted RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SYPP08247 313 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZCCHC18P0CG32 403 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SMIM10L1P0DMW3 83 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 HOXB9P17482 250 aaPredicted RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ALOX12P18054 663 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EFNA1P20827 205 aaPredicted RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PPIBP23284 216 aaKnown RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CERS1P27544 350 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 HTR1EP28566 365 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CCT8P50990 548 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 OR1D5P58170 312 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 VSX2P58304 361 aaPredicted RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 BTN3A2P78410 334 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GPLD1P80108 840 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ANGPT1Q15389 498 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NR0B2Q15466 257 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 AASDHQ4L235 1098 aaPredicted RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TRIM61Q5EBN2 209 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NDUFAF5Q5TEU4 345 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NKAIN2Q5VXU1 208 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MRM1Q6IN84 353 aaKnown RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LCN8Q6JVE9 175 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZFP1Q6P2D0 407 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC23A3Q6PIS1 610 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 KANSL1Q7Z3B3 1105 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PTRH1Q86Y79 214 aaKnown RBP7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GATAD2AQ86YP4 633 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 OR4N4Q8N0Y3 316 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MMP21Q8N119 569 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CARFQ8N187 725 aa7.25□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CSNK1A1LQ8N752 337 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms