RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 EPN3Q9H201 632 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 KCNK13Q9HB14 408 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 ZNF304Q9HCX3 659 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 THSD1Q9NS62 852 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 KLHL14Q9P2G3 628 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 DCTN4Q9UJW0 460 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 SEC16AO15027 2179 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 GOLGA8QA0A0J9YX86 632 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 ARHGAP10A1A4S6 786 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 GOLGA8OA6NCC3 632 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 GOLGA8NF8WBI6 632 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 PCDH7O60245 1069 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 BRINP1O60477 761 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 KLK1P06870 262 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 KLK3P07288 261 aaPredicted RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 PIM1P11309 404 aaPredicted RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 LBPP18428 481 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 AGXTP21549 392 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 FBLP22087 321 aaKnown RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 MAPK1P28482 360 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 GSTM5P46439 218 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 ERVK-8P63133 956 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 RPL38P63173 70 aaKnown RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 EMX2Q04743 252 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 CCNYL2Q5T2Q4 361 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 NOXRED1Q6NXP6 359 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 CYP20A1Q6UW02 462 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 C6orf15Q6UXA7 325 aaPredicted RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 ZNF517Q6ZMY9 492 aaPredicted RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 CPLX4Q7Z7G2 160 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 METTL27Q8N6F8 245 aaPredicted RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 GALNT6Q8NCL4 622 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 CEP70Q8NHQ1 597 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 THOC1Q96FV9 657 aaKnown RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 OR52B2Q96RD2 323 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 CCDC28BQ9BUN5 200 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 LYRM4Q9HD34 91 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 TCF7L2Q9NQB0 619 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 LYARQ9NX58 379 aaKnown RBP19.86■□□□□ 0.77
LSM6-207ENST00000515311 ASIC5Q9NY37 505 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 GIMAP2Q9UG22 337 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 MAP4K5Q9Y4K4 846 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 AK5Q9Y6K8 562 aa19.86■□□□□ 0.77
LSM6-207ENST00000515311 A0A0G2JND7 137 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 ZNF860A6NHJ4 632 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 STMND1H3BQB6 276 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 SPINK2P20155 84 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 OR1D4P47884 311 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 MAPK12P53778 367 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 TRA2BP62995 288 aaKnown RBP19.85■□□□□ 0.77
LSM6-207ENST00000515311 SLAMF1Q13291 335 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 COL9A2Q14055 689 aaPredicted RBP19.85■□□□□ 0.77
LSM6-207ENST00000515311 SLC9A5Q14940 896 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 MRM1Q6IN84 353 aaKnown RBP19.85■□□□□ 0.77
LSM6-207ENST00000515311 SPATA19Q7Z5L4 167 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 FNDC5Q8NAU1 212 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 COL26A1Q96A83 441 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 FKBP10Q96AY3 582 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 EBF4Q9BQW3 602 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 NOP53Q9NZM5 478 aaKnown RBP19.85■□□□□ 0.77
LSM6-207ENST00000515311 PHF11Q9UIL8 331 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 MAU2Q9Y6X3 613 aa19.85■□□□□ 0.77
LSM6-207ENST00000515311 NUP210LQ5VU65 1888 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 GNG14A0A1W2PPG7 69 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 TMPRSS11DO60235 418 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 GBAP04062 536 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 ANXA4P09525 319 aaPredicted RBP19.84■□□□□ 0.77
LSM6-207ENST00000515311 FAM58BPP0C7Q3 252 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 LIM2P55344 173 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 SHC2P98077 582 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 RUNX2Q13950 521 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 LSM12Q3MHD2 195 aaKnown RBP19.84■□□□□ 0.77
LSM6-207ENST00000515311 ARHGAP40Q5TG30 622 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 NXNQ6DKJ4 435 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 COX15Q7KZN9 410 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 CA13Q8N1Q1 262 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 ESX1Q8N693 406 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 OR5T3Q8NGG3 340 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 ADAMTS18Q8TE60 1221 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.84■□□□□ 0.77
LSM6-207ENST00000515311 RNF31Q96EP0 1072 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 ZNF578Q96N58 590 aaPredicted RBP19.84■□□□□ 0.77
LSM6-207ENST00000515311 TMEM120AQ9BXJ8 343 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 SLC22A11Q9NSA0 550 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 MS4A12Q9NXJ0 267 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 KCMF1Q9P0J7 381 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 PADI1Q9ULC6 663 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 DAPP1Q9UN19 280 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 EIF3LQ9Y262 564 aaKnown RBP19.84■□□□□ 0.77
LSM6-207ENST00000515311 DLGAP4Q9Y2H0 992 aa19.84■□□□□ 0.77
LSM6-207ENST00000515311 WBP11Q9Y2W2 641 aaKnown RBP19.84■□□□□ 0.77
LSM6-207ENST00000515311 AKAP13Q12802 2813 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 CHST10O43529 356 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 GUCY1B2O75343 617 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 CCNYL3P0C7X3 344 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 BCKDHAP12694 445 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 RNH1P13489 461 aaKnown RBP19.83■□□□□ 0.77
LSM6-207ENST00000515311 PCSK2P16519 638 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 IL10P22301 178 aa19.83■□□□□ 0.77
LSM6-207ENST00000515311 OLR1P78380 273 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms