RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 RGS4P49798 205 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 SP140Q13342 867 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 XKR6Q5GH73 641 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 CATSPEREQ5SY80 951 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 UGT3A1Q6NUS8 523 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 GK5Q6ZS86 529 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 TRILQ7L0X0 811 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 MYO1HQ8N1T3 1032 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 TMEM251Q8N6I4 163 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 SLCO2A1Q92959 643 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 SMR3AQ99954 134 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 AARSD1Q9BTE6 412 aaKnown RBP12.94□□□□□ -0.34
CCDC58-207ENST00000498466 LDAHQ9H6V9 325 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 MMACHCQ9Y4U1 282 aa12.94□□□□□ -0.34
CCDC58-207ENST00000498466 ABCA4P78363 2273 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 PHF3Q92576 2039 aaKnown RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 AQP7O14520 342 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 GLSO94925 669 aaPredicted RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 HAUS5O94927 633 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 PPP2R1BP30154 601 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 ADSLP30566 484 aaPredicted RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 AHRP35869 848 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 SOX3P41225 446 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 SCTRP47872 440 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 KCNJ1P48048 391 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 MAN2A2P49641 1150 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 CSHL1Q14406 222 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 SIX1Q15475 284 aaPredicted RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 PHKG1Q16816 387 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 WLSQ5T9L3 541 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 ARMC3Q5W041 872 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 DUPD1Q68J44 220 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 DRICH1Q6PGQ1 229 aaPredicted RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 CA13Q8N1Q1 262 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 SREK1Q8WXA9 508 aaKnown RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 SARAFQ96BY9 339 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 OR4K3Q96R72 315 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 FAM173AQ9BQD7 235 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 DESI2Q9BSY9 194 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 SPNS1Q9H2V7 528 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 KLHL31Q9H511 634 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 EXO5Q9H790 373 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 DMRT3Q9NQL9 472 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 C20orf96Q9NUD7 363 aaPredicted RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 ARL15Q9NXU5 204 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 MYOTQ9UBF9 498 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 B4GALT7Q9UBV7 327 aa12.93□□□□□ -0.34
CCDC58-207ENST00000498466 PPIEQ9UNP9 301 aaKnown RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 HRNRQ86YZ3 2850 aaPredicted RBP12.93□□□□□ -0.34
CCDC58-207ENST00000498466 FLNAP21333 2647 aaKnown RBP12.92□□□□□ -0.34
CCDC58-207ENST00000498466 ATP6AP2A0A1C7CYW4 349 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 MAGEB16A2A368 324 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CTAGE15A4D2H0 777 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 WWP2O00308 870 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 ATP6AP2O75787 350 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 RAF1P04049 648 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 PTMSP20962 102 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CNR1P21554 472 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 VPS41P49754 854 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 GPR143P51810 404 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 SLC13A2Q13183 592 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 BMPR2Q13873 1038 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 KEAP1Q14145 624 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 TRIP13Q15645 432 aaPredicted RBP12.92□□□□□ -0.34
CCDC58-207ENST00000498466 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
CCDC58-207ENST00000498466 DEFB113Q30KQ7 82 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 FLYWCH1Q4VC44 716 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 RIPPLY2Q5TAB7 128 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CTAGE6Q86UF2 777 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
CCDC58-207ENST00000498466 ANKRD53Q8N9V6 530 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 TRPV3Q8NET8 790 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 OR56A3Q8NH54 315 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CALML6Q8TD86 181 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 SLC5A11Q8WWX8 675 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 NEIL2Q969S2 332 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 C18orf12Q96KH6 178 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 TSNARE1Q96NA8 513 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 RASL10BQ96S79 203 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 NDNQ99608 321 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CNPPD1Q9BV87 410 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 IL1RL2Q9HB29 575 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 PRTFDC1Q9NRG1 225 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 FBXO5Q9UKT4 447 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 CBLCQ9ULV8 474 aa12.92□□□□□ -0.34
CCDC58-207ENST00000498466 ZCWPW2A0A1B0GU75 182 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SDR42E2A6NKP2 422 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SYT5O00445 386 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SUSD5O60279 629 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 CELA3AP09093 270 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms