RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 MT-ND2P03891 347 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TK1P04183 234 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HOXD4P09016 255 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PAEPP09466 180 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF806P0C7X5 589 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CCNB1P14635 433 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CD36P16671 472 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF7P17097 686 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CR2P20023 1033 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NR1D1P20393 614 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DRD5P21918 477 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CCND3P30281 292 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SHMT2P34897 504 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 AHRP35869 848 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MTNR1BP49286 362 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 VEGFCP49767 419 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SERPINH1P50454 418 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC16A1P53985 500 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RGS8P57771 180 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RPS16P62249 146 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PPP2CBP62714 309 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PPP2CAP67775 309 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CSNK1G2P78368 415 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GAGE1Q13065 139 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ASAH1Q13510 395 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RCAN2Q14206 197 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GAMTQ14353 236 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GRM7Q14831 915 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 EIF4HQ15056 248 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SHBQ15464 509 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KLHL22Q53GT1 634 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TEX44Q53QW1 395 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RABGAP1LQ5R372 815 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CELF3Q5SZQ8 465 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GLB1LQ6UWU2 654 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CLEC9AQ6UXN8 241 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CFAP77Q6ZQR2 320 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZBTB49Q6ZSB9 765 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM26Q6ZUK4 368 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 C1orf186Q6ZWK4 172 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KCTD9Q7L273 389 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SPATA19Q7Z5L4 167 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POLNQ7Z5Q5 900 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SATL1Q86VE3 508 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CTAGE3PQ8IX95 158 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SPAG16Q8N0X2 631 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RUSC2Q8N2Y8 1516 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SPATA6LQ8N4H0 392 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POC5Q8NA72 575 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 REPS2Q8NFH8 660 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 Q8TCH9 128 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 OIT3Q8WWZ8 545 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 FIG4Q92562 907 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DVL3Q92997 716 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 FUBP1Q96AE4 644 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 R3HDM4Q96D70 268 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ECHDC3Q96DC8 303 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 LGMNQ99538 433 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF559Q9BR84 538 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CPPED1Q9BRF8 314 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PTDSS2Q9BVG9 487 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GTPBP2Q9BX10 602 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DGCR6LQ9BY27 220 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ANGPTL4Q9BY76 406 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RBM38Q9H0Z9 239 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DNTTIP1Q9H147 329 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MUC13Q9H3R2 512 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GOLPH3Q9H4A6 298 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KAT8Q9H7Z6 458 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POLR1BQ9H9Y6 1135 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 IL21RQ9HBE5 538 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ABCC13Q9NSE7 274 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POT1Q9NUX5 634 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC59Q9P031 241 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DNAJB11Q9UBS4 358 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NKX1-2Q9UD57 310 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MIOXQ9UGB7 285 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RAPGEFL1Q9UHV5 662 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TRPC5Q9UL62 973 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CDC14AQ9UNH5 594 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GOLT1BQ9Y3E0 138 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 YTHDC2Q9H6S0 1430 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 JCADQ9P266 1359 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MED23Q9ULK4 1368 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ABCC4O15439 1325 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM230AA0A1W2PPH8 454 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC5A10A0PJK1 596 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HELTA6NFD8 242 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2AG2A6NM03 316 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PDZK1P1A8MUH7 402 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 K7ESM1 405 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CDC7O00311 574 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CES2O00748 559 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZBTB5O15062 677 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MDM4O15151 490 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SURF4O15260 269 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGEB2O15479 319 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MSI1O43347 362 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PRKYO43930 277 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms