RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 C11orf24Q96F05 449 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 MAELQ96JY0 434 aaKnown RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 IFT80Q9P2H3 777 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 ANGPTL2Q9UKU9 493 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 A0A0A6YYD5 115 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 TEX51A0A1B0GUA7 166 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 GMNCA6NCL1 334 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 PCDH7O60245 1069 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 DIAPH2O60879 1101 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 ITGAXP20702 1163 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 MAPK1P28482 360 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 TPP2P29144 1249 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 EPHA3P29320 983 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 TIA1P31483 386 aaKnown RBP eCLIP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 RPL38P63173 70 aaKnown RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 SLAMF1Q13291 335 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 TBC1D25Q3MII6 688 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 RFTN2Q52LD8 501 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 ACAD11Q709F0 780 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 TIPARPQ7Z3E1 657 aaKnown RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 AMER3Q8N944 861 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 FNDC5Q8NAU1 212 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 NSRP1Q9H0G5 558 aaKnown RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 LYRM4Q9HD34 91 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 LYARQ9NX58 379 aaKnown RBP20.59■□□□□ 0.89
C9orf3-222ENST00000496567 SPACA6W5XKT8 324 aa20.59■□□□□ 0.89
C9orf3-222ENST00000496567 WDFY3Q8IZQ1 3526 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 GNG14A0A1W2PPG7 69 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 C9J4A7 227 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 CHST10O43529 356 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 RAD1O60671 282 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 PRR35P0CG20 571 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 LBPP18428 481 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 MAPK12P53778 367 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 RUNX2Q13950 521 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 SLC9B1Q4ZJI4 515 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 NOXRED1Q6NXP6 359 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 LARP4Q71RC2 724 aaKnown RBP eCLIP20.58■□□□□ 0.88
C9orf3-222ENST00000496567 PARP9Q8IXQ6 854 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 OR5T3Q8NGG3 340 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 OR51Q1Q8NH59 317 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 ACTRT2Q8TDY3 377 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 FKBP10Q96AY3 582 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 YIPF2Q9BWQ6 316 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 WDR55Q9H6Y2 383 aaPredicted RBP20.58■□□□□ 0.88
C9orf3-222ENST00000496567 HCN3Q9P1Z3 774 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 TRPC4Q9UBN4 977 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 GPN3Q9UHW5 284 aaPredicted RBP20.58■□□□□ 0.88
C9orf3-222ENST00000496567 PHF11Q9UIL8 331 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 DAPP1Q9UN19 280 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 SDK2Q58EX2 2172 aa20.58■□□□□ 0.88
C9orf3-222ENST00000496567 SEC16AO15027 2179 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GOLGA8QA0A0J9YX86 632 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GOLGA8OA6NCC3 632 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GOLGA8NF8WBI6 632 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GUCY1B2O75343 617 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 ALBP02768 609 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GBAP04062 536 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 CD63P08962 238 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 ANXA4P09525 319 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 FAM58BPP0C7Q3 252 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 RNH1P13489 461 aaKnown RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 ACPPP15309 386 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 IL10P22301 178 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GSTM5P46439 218 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 SEC24CP53992 1094 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 TRA2BP62995 288 aaKnown RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 OLR1P78380 273 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 RAE1P78406 368 aaKnown RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 EMX2Q04743 252 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 NXNQ6DKJ4 435 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 MRM1Q6IN84 353 aaKnown RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 OVCH1Q7RTY7 1134 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 CA13Q8N1Q1 262 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 CEP70Q8NHQ1 597 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 ADAMTS18Q8TE60 1221 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 STON2Q8WXE9 905 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 THOC1Q96FV9 657 aaKnown RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 CHST8Q9H2A9 424 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 MKKSQ9NPJ1 570 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 SLC22A11Q9NSA0 550 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 MS4A12Q9NXJ0 267 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 ZNF282Q9UDV7 671 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 GIMAP2Q9UG22 337 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 DCTN4Q9UJW0 460 aa20.57■□□□□ 0.88
C9orf3-222ENST00000496567 POLR3HQ9Y535 204 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-222ENST00000496567 PSMD12O00232 456 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-222ENST00000496567 TMPRSS11DO60235 418 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 ATXN8OSP0DMR3 200 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 LIPCP11150 499 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 IDH3AP50213 366 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 LIM2P55344 173 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 ERVK-8P63133 956 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 MAT1AQ00266 395 aaKnown RBP20.56■□□□□ 0.88
C9orf3-222ENST00000496567 OCA2Q04671 838 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 FAM199XQ6PEV8 388 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-222ENST00000496567 COX15Q7KZN9 410 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 CPLX4Q7Z7G2 160 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 GPR180Q86V85 440 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms