RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 PAIP1Q9H074 479 aaKnown RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 SMOC1Q9H4F8 434 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 GORASP2Q9H8Y8 452 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 COPS7BQ9H9Q2 264 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 CCM2LQ9NUG4 571 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 VAPAQ9P0L0 249 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF624Q9P2J8 865 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-214ENST00000495485 ANAPC2Q9UJX6 822 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 SH2B3Q9UQQ2 575 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 PCDHB14Q9Y5E9 798 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 SLCO1B1Q9Y6L6 691 aa9.79□□□□□ -0.84
HDAC3-214ENST00000495485 A6NCN8 305 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CLIC1O00299 241 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 TM4SF5O14894 197 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SH3BGRLO75368 114 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ETHE1O95571 254 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CPSF4O95639 269 aaKnown RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 KRT75O95678 551 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SERPIND1P05546 499 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SLC35G6P0C7Q6 338 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CD59P13987 128 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ATP6V1C1P21283 382 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 FASP25445 335 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 PSMB5P28074 263 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SSR2P43308 183 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 POLE2P56282 527 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 TAS2R50P59544 299 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 PLIN5Q00G26 463 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CHRNB3Q05901 458 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SLC9A5Q14940 896 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CYP51A1Q16850 503 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SLC5A12Q1EHB4 618 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 GRAMD1BQ3KR37 738 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 TBCELQ5QJ74 424 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 MANEAQ5SRI9 462 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 FAM71E1Q6IPT2 247 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CYP2R1Q6VVX0 501 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 KANSL1Q7Z3B3 1105 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SERPINA11Q86U17 422 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 NRROSQ86YC3 692 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SPPL2CQ8IUH8 684 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 NAXDQ8IW45 347 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SLC30A8Q8IWU4 369 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 EID3Q8N140 333 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 RNF175Q8N4F7 328 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF740Q8NDX6 193 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 OR4A15Q8NGL6 344 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 OR10A6Q8NH74 314 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ZFP28Q8NHY6 868 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 WDR48Q8TAF3 677 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ZDHHC1Q8WTX9 485 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF764Q96H86 408 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SLC45A3Q96JT2 553 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 DDX31Q9H8H2 851 aaKnown RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 SCHIP1Q9P0W5 487 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CPNE7Q9UBL6 633 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 EGFL7Q9UHF1 273 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 CNOT11Q9UKZ1 510 aaKnown RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 PSME2Q9UL46 239 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 PCDHGA1Q9Y5H4 931 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 GMEB1Q9Y692 573 aa9.78□□□□□ -0.84
HDAC3-214ENST00000495485 TPRP12270 2363 aaKnown RBP9.78□□□□□ -0.84
HDAC3-214ENST00000495485 A0A1W2PRB8 838 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 FEZF1A0PJY2 475 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 GSAPA4D1B5 854 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 OR6C74A6NCV1 312 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 H0YJX3 145 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 H3BNX3 289 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 SAP18O00422 153 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 PLPP1O14494 284 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 TXNDC9O14530 226 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 TNFSF14O43557 240 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 GP1BAP07359 652 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 FURINP09958 794 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 GPX2P18283 190 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 GGT1P19440 569 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 DDCP20711 480 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ERFP50548 548 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ANXA11P50995 505 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 MTPNP58546 118 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 CYP4F2P78329 520 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 HHEXQ03014 270 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 KLC1Q07866 573 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 PDE7AQ13946 482 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 FXNQ16595 210 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 RSPO4Q2I0M5 234 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 SWT1Q5T5J6 900 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 OGFRL1Q5TC84 451 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 SAMD14Q8IZD0 417 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ADGRF3Q8IZF5 1079 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ANKRD53Q8N9V6 530 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 CAMKVQ8NCB2 501 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 FAM46DQ8NEK8 389 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 OR2L5Q8NG80 312 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 CCL4L1Q8NHW4 92 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms