RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	EHD3	Q9NZN3	535 aa		12.85	□□□□□ -0.35
APTX-231	ENST00000494973	NAALAD2	Q9Y3Q0	740 aa		12.85	□□□□□ -0.35
APTX-231	ENST00000494973	HCRTR1	O43613	425 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	STATH	P02808	62 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	KLK3	P07288	261 aa	Predicted RBP	12.84	□□□□□ -0.35
APTX-231	ENST00000494973	CD63	P08962	238 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	FAM58BP	P0C7Q3	252 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	DRD2	P14416	443 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	IL1RN	P18510	177 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	SDC1	P18827	310 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	AGXT	P21549	392 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	JAK1	P23458	1154 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	CD82	P27701	267 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	TPP2	P29144	1249 aa	Predicted RBP	12.84	□□□□□ -0.35
APTX-231	ENST00000494973	PPP2R1B	P30154	601 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	PLA2G5	P39877	138 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	CLDN8	P56748	225 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	SLAMF1	Q13291	335 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	DSG2	Q14126	1118 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
APTX-231	ENST00000494973	TTLL10	Q6ZVT0	673 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	TMPRSS7	Q7RTY8	843 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	GPR180	Q86V85	440 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	SAMD14	Q8IZD0	417 aa	Predicted RBP	12.84	□□□□□ -0.35
APTX-231	ENST00000494973	CATSPER2	Q96P56	530 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	MACROD1	Q9BQ69	325 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	EBPL	Q9BY08	206 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	DPY30	Q9C005	99 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	FAM117A	Q9C073	453 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	MIEF1	Q9NQG6	463 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	STARD5	Q9NSY2	213 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	ATAD3A	Q9NVI7	634 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	DLL3	Q9NYJ7	618 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	PISD	Q9UG56	409 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	NDOR1	Q9UHB4	597 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	CAPN7	Q9Y6W3	813 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	DNAH14	Q0VDD8	3507 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973	CNOT1	A5YKK6	2376 aa	Known RBP	12.84	□□□□□ -0.35
APTX-231	ENST00000494973	PIEZO1	Q92508	2521 aa		12.84	□□□□□ -0.35
APTX-231	ENST00000494973		A0A0A6YYC8	382 aa	Predicted RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	C1orf226	A1L170	272 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973		I3L1I5	382 aa	Predicted RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	RTCA	O00442	366 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	FCHO1	O14526	889 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	EED	O75530	441 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ALDOC	P09972	364 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	G6PD	P11413	515 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	RNH1	P13489	461 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	FBL	P22087	321 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ALAS2	P22557	587 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	CERS1	P27544	350 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	RAB38	P57729	211 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	RAE1	P78406	368 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	KLC1	Q07866	573 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ABHD18	Q0P651	414 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	LRRC74A	Q0VAA2	488 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	FAM91A1	Q658Y4	838 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	PWWP2B	Q6NUJ5	590 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	IGF2-AS	Q6U949	168 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF793	Q6ZN11	406 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ALYREF	Q86V81	257 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	C16orf78	Q8WTQ4	265 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	TSPEAR	Q8WU66	669 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	TESC	Q96BS2	214 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	MMAB	Q96EY8	250 aa	Predicted RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	OR1F2P	Q96R84	312 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ULBP3	Q9BZM4	244 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	AICDA	Q9GZX7	198 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	POLR1B	Q9H9Y6	1135 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF304	Q9HCX3	659 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	LHX9	Q9NQ69	397 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	SAR1A	Q9NR31	198 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	GIMAP4	Q9NUV9	329 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	C14orf105	Q9NVL8	296 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	GIMAP2	Q9UG22	337 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	PSME2	Q9UL46	239 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	DAPP1	Q9UN19	280 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	DLGAP4	Q9Y2H0	992 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	MAP4K5	Q9Y4K4	846 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	GPR45	Q9Y5Y3	372 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	COPG1	Q9Y678	874 aa	Known RBP	12.83	□□□□□ -0.36
APTX-231	ENST00000494973	WDR87	Q6ZQQ6	2873 aa		12.83	□□□□□ -0.36
APTX-231	ENST00000494973	FOXS1	O43638	330 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TBX19	O60806	448 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	SLC22A3	O75751	556 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	ONECUT2	O95948	504 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	CYC1	P08574	325 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	NR2F6	P10588	404 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	CCL4	P13236	92 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	CPN2	P22792	545 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	RBMS1	P29558	406 aa	Known RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	MAPK10	P53779	464 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	DIO3	P55073	304 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	KCNK10	P57789	538 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TAS2R50	P59544	299 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	DCD	P81605	110 aa	Known RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TNFRSF17	Q02223	184 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	SRSF11	Q05519	484 aa	Known RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TARDBP	Q13148	414 aa	Known RBP eCLIP	12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms