RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	STS	P08842	583 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	OR4E1	P0C645	316 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	FAM228B	P0C875	321 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	GAGE12F	P0CL80	117 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	GAGE12G	P0CL81	117 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	GAGE12I	P0CL82	117 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	MYL6B	P14649	208 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CORO1A	P31146	461 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	GTF2H1	P32780	548 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CDH5	P33151	784 aa	Predicted RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CD79B	P40259	229 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	PRCP	P42785	496 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	EIF2B2	P49770	351 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	NKX2-5	P52952	324 aa	Predicted RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	RPS3A	P61247	264 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	PSMC6	P62333	389 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	SKP1	P63208	163 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	SLC18A2	Q05940	514 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	NPRL3	Q12980	569 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	GAGE1	Q13065	139 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	GAGE4	Q13068	117 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	LCP2	Q13094	533 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	HFE	Q30201	348 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	C2CD6	Q53TS8	623 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF311	Q5JNZ3	666 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	SPATA46	Q5T0L3	261 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	RIPPLY2	Q5TAB7	128 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	TRAT1	Q6PIZ9	186 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	SUSD1	Q6UWL2	747 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	LINC00523	Q86TU6	105 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	LHFPL3	Q86UP9	236 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	VASH2	Q86V25	355 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	HERC6	Q8IVU3	1022 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CNTN4	Q8IWV2	1026 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CHERP	Q8IWX8	916 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	TIGD4	Q8IY51	512 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CD300LF	Q8TDQ1	290 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	DTD1	Q8TEA8	209 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ING5	Q8WYH8	240 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ST8SIA4	Q92187	359 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	PROX1	Q92786	737 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	NTAN1	Q96AB6	310 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ISG20	Q96AZ6	181 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	OTULIN	Q96BN8	352 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	OTUB2	Q96DC9	234 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	FAM120B	Q96EK7	910 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ALG14	Q96F25	216 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	STAMBPL1	Q96FJ0	436 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	WBP1	Q96G27	269 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZBTB18	Q99592	522 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	BCL2L14	Q9BZR8	327 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	DERL2	Q9GZP9	239 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CTDSP1	Q9GZU7	261 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	HOXD1	Q9GZZ0	328 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	OR51B6	Q9H340	312 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	RIMS4	Q9H426	269 aa	Predicted RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	C10orf88	Q9H8K7	445 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	SDF2L1	Q9HCN8	221 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ELOVL2	Q9NXB9	296 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ANKRD10	Q9NXR5	420 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	DDX43	Q9NXZ2	648 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CTSF	Q9UBX1	484 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	POLL	Q9UGP5	575 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	TRMT6	Q9UJA5	497 aa	Known RBP	4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ANAPC2	Q9UJX6	822 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	PCDHAC2	Q9Y5I4	1007 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CSNK1G3	Q9Y6M4	447 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672		V9GYQ6	96 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	IFT140	Q96RY7	1462 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	NRCAM	Q92823	1304 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	RFX7	Q2KHR2	1363 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	ANKRD30B	Q9BXX2	1392 aa		4.4	□□□□□ -1.71
CCDC66-222	ENST00000494672	CPSF1	Q10570	1443 aa	Known RBP	4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	SCAF11	Q99590	1463 aa	Known RBP	4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	MRC2	Q9UBG0	1479 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	SH3PXD2B	A1X283	911 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	BCLAF3	A2AJT9	711 aa	Known RBP	4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF716	A6NP11	495 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	AGAP14	A8MT82	685 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	FAM86B1	E9PN63	330 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	SNAP23	O00161	211 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	NTN3	O00634	580 aa	Predicted RBP	4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	TOR1A	O14656	332 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	AP5Z1	O43299	807 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	SCO2	O43819	266 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	VEGFD	O43915	354 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	MAGEC1	O60732	1142 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	DNAJB6	O75190	326 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	CDH16	O75309	829 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	PRDM1	O75626	825 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	GPX5	O75715	221 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	CCNK	O75909	580 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	MBD3	O95983	291 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	MB	P02144	154 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	PLEK	P08567	350 aa	Predicted RBP	4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	PLA2G4B	P0C869	781 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	ZNF735	P0CB33	412 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	TFPI	P10646	304 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	TCF4	P15884	667 aa		4.39	□□□□□ -1.71
CCDC66-222	ENST00000494672	GIF	P27352	417 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms