RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DCTP40126 519 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 SLC19A1P41440 591 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 RABIFP47224 123 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 CDK9P50750 372 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 ITGA1P56199 1179 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TRA2BP62995 288 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 ADARB1P78563 741 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 VLDLRP98155 873 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 EEF1A2Q05639 463 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 VAC14Q08AM6 782 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 FADDQ13158 208 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 LRRC32Q14392 662 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TMEM35AQ53FP2 167 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 CYBRD1Q53TN4 286 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TOR1AIP1Q5JTV8 583 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 RNF220Q5VTB9 566 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 SAXO2Q658L1 398 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 KRT80Q6KB66 452 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 USP51Q70EK9 711 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 RD3Q7Z3Z2 195 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 VTCN1Q7Z7D3 282 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TMEM179BQ7Z7N9 219 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 AMIGO1Q86WK6 493 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 OFCC1Q8IZS5 231 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 HS3ST5Q8IZT8 346 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 MFSD9Q8NBP5 474 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 C11orf65Q8NCR3 313 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 PJA1Q8NG27 643 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 OR5K1Q8NHB7 308 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 MAGEE2Q8TD90 523 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 OR5P2Q8WZ92 322 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 MAL2Q969L2 176 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TRAPPC9Q96Q05 1148 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 C17orf62Q9BQA9 187 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 DPH7Q9BTV6 452 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 SLC6A16Q9GZN6 736 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 SOX17Q9H6I2 414 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 DDX31Q9H8H2 851 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 NEUROD4Q9HD90 331 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 POLMQ9NP87 494 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 CD320Q9NPF0 282 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 C2orf42Q9NWW7 574 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TRNAU1APQ9NX07 287 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 TAS2R9Q9NYW1 312 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 OR6C2Q9NZP2 312 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 RAPGEFL1Q9UHV5 662 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 WBP11Q9Y2W2 641 aaKnown RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 MAGED1Q9Y5V3 778 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-208ENST00000494028 COLEC10Q9Y6Z7 277 aa10.14□□□□□ -0.79
CLCN6-208ENST00000494028 OR2A25A4D2G3 310 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 LRIT2A6NDA9 550 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 ISM1B1AKI9 464 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 PRAMEF26H0Y7S4 382 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 GCM2O75603 506 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 NTRK1P04629 796 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 DDX5P17844 614 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 UQCRC2P22695 453 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 GRK3P35626 688 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 ALDH9A1P49189 494 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 DGKEP52429 567 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 PCBP4P57723 403 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 RBBP4Q09028 425 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 EIF2B5Q13144 721 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 BIRC2Q13490 618 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TDGQ13569 410 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 HEPACAMQ14CZ8 416 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TEAD4Q15561 434 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 SLC5A12Q1EHB4 618 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 KCTD21Q4G0X4 260 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 LIN52Q52LA3 116 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 OTUD3Q5T2D3 398 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 ANKRD34AQ69YU3 496 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 MRM1Q6IN84 353 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 IYDQ6PHW0 289 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 SPESP1Q6UW49 350 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 ANGPTL8Q6UXH0 198 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 Q6ZSR6 202 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 VN1R4Q7Z5H5 301 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TRIM73Q86UV7 250 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 STK32CQ86UX6 486 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 RNF130Q86XS8 419 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 ADHFE1Q8IWW8 467 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 NAGSQ8N159 534 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 DHRSXQ8N5I4 330 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 NFKBIDQ8NI38 313 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 CYGBQ8WWM9 190 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 LCN9Q8WX39 176 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 EXOSC8Q96B26 276 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TBC1D20Q96BZ9 403 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 SDCCAG3Q96C92 435 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 MS4A6EQ96DS6 147 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 RMND5BQ96G75 393 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TOE1Q96GM8 510 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 RDH12Q96NR8 316 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 GAS2L1Q99501 681 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 ORAI3Q9BRQ5 295 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms