RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 LAYNQ6UX15 382 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 USP30Q70CQ3 517 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PARS2Q7L3T8 475 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PGBD5Q8N414 524 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 Q8NFD4 153 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 OR5T1Q8NG75 326 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 OR2W6PQ8NHA6 318 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DNAJB8Q8NHS0 232 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ZNF671Q8TAW3 534 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ACTL9Q8TC94 416 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 TFB1MQ8WVM0 346 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 CCDC74BQ96LY2 380 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 MAGEB10Q96LZ2 347 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 HSPA12BQ96MM6 686 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 RILPQ96NA2 401 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 KLHL32Q96NJ5 620 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DUSP15Q9H1R2 295 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 C1orf21Q9H246 121 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PCDH9Q9HC56 1237 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 WSB2Q9NYS7 404 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 EPHA6Q9UF33 1036 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 FZD4Q9ULV1 537 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 CDC14AQ9UNH5 594 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 LIPT1Q9Y234 373 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DNAH14Q0VDD8 3507 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PIPSLA2A3N6 862 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 A8MUA0 341 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 HACD1B0YJ81 288 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 IFNB1P01574 187 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 JCHAINP01591 159 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 IGLV3-19P01714 112 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 HLA-DQB2P05538 268 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ZNF888P0CJ79 500 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 JUPP14923 745 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ITGB7P26010 798 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 SERPINA4P29622 427 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 CXCR5P32302 372 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PTGER3P43115 390 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ADPRHP54922 357 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 SKP1P63208 163 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 BCL2L1Q07817 233 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ILF3Q12906 894 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 USP10Q14694 798 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 GRM7Q14831 915 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 NOMO1Q15155 1222 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 KYNUQ16719 465 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 SWI5Q1ZZU3 235 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PDZK1Q5T2W1 519 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DDI2Q5TDH0 399 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 STEAP3Q658P3 488 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 GALNT18Q6P9A2 607 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DARS2Q6PI48 645 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 GDPD4Q6W3E5 623 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ERN2Q76MJ5 926 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ANKRD46Q86W74 232 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DMRTC2Q8IXT2 367 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PSMA8Q8TAA3 256 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 NSL1Q96IY1 281 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PPP3R2Q96LZ3 170 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 KCNC2Q96PR1 638 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 TRNT1Q96Q11 434 aaKnown RBP11.13□□□□□ -0.63
BRCA1-222ENST00000493919 MGME1Q9BQP7 344 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 TLR10Q9BXR5 811 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 WWP1Q9H0M0 922 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PLSCR4Q9NRQ2 329 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ACTR10Q9NZ32 417 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ZFP69BQ9UJL9 534 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 ZNF229Q9UJW7 825 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 MGAT4AQ9UM21 535 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 HSPE1-MOB4S4R3N1 261 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 PCM1Q15154 2024 aa11.13□□□□□ -0.63
BRCA1-222ENST00000493919 TCAPO15273 167 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 TMEM63AO94886 807 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 PCDH8O95206 1070 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 COX4I1P13073 169 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 VEGFCP49767 419 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 PPARDQ03181 441 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 PEX6Q13608 980 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 FGL2Q14314 439 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 SEC23BQ15437 767 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 PIP5KL1Q5T9C9 394 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 OGFRL1Q5TC84 451 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-222ENST00000493919 NCEH1Q6PIU2 408 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 KIAA0408Q6ZU52 694 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 AMIGO1Q86WK6 493 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 CHERPQ8IWX8 916 aaKnown RBP11.12□□□□□ -0.63
BRCA1-222ENST00000493919 RGL4Q8IZJ4 473 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 OR8H3Q8N146 312 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 KYQ8NBH2 561 aa11.12□□□□□ -0.63
BRCA1-222ENST00000493919 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms