RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 C5orf30Q96GV9 206 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 C18orf12Q96KH6 178 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 POM121L2Q96KW2 1035 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 NSMCE3Q96MG7 304 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 AGAP4Q96P64 663 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 DDX50Q9BQ39 737 aaKnown RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 SYT11Q9BT88 431 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 TRIM7Q9C029 511 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 WWTR1Q9GZV5 400 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ABCG4Q9H172 646 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ZNF665Q9H7R5 613 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 GPN1Q9HCN4 374 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 S100A14Q9HCY8 104 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 FAM212BQ9NTI7 297 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 ZNF319Q9P2F9 582 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 PSORS1C1Q9UIG5 152 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 EXOC7Q9UPT5 735 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 WIPI2Q9Y4P8 454 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 SYCE3A1L190 88 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 DDX39AO00148 427 aaKnown RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 PSMD3O43242 534 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 SYT7O43581 403 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 MTRF1O75570 445 aaKnown RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 CEACAM4O75871 244 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 ZFAND5O76080 213 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 NUDT17P0C025 328 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 VDRP11473 427 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 HLA-DPA1P20036 260 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 CLCN4P51793 760 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 TMEM50BP56557 158 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 PEX3P56589 373 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 EVCP57679 992 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 ABCE1P61221 599 aaKnown RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 ARF5P84085 180 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 ACTN3Q08043 901 aaPredicted RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 AP1B1Q10567 949 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 KRT31Q15323 416 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 AARDQ4LEZ3 155 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 SERPINA12Q8IW75 414 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 LAX1Q8IWV1 398 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 DND1Q8IYX4 353 aaKnown RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 SFRP1Q8N474 314 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 TRPV3Q8NET8 790 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 OR10G7Q8NGN6 311 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 OR5M9Q8NGP3 310 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 ATP6V0A1Q93050 837 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 WBP2Q969T9 261 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 FGFBP2Q9BYJ0 223 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 VIPAS39Q9H9C1 493 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 MID1IP1Q9NPA3 183 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 ZCCHC3Q9NUD5 404 aaKnown RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 PLEK2Q9NYT0 353 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 AKAP7Q9P0M2 348 aaPredicted RBP3.36□□□□□ -1.87
CLK1-213ENST00000492793 MAD2L2Q9UI95 211 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 ERVK-19Q9WJR5 959 aa3.36□□□□□ -1.87
CLK1-213ENST00000492793 LOC105371242A0A075B767 164 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 C5orf51A6NDU8 294 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 H7C423 109 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 K7EQD1 137 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 INPP4BO15327 924 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 IDH3BO43837 385 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 HSF2BPO75031 334 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 PNPP00491 289 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 ADORA3P0DMS8 318 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 ODC1P11926 461 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 B4GALT1P15291 398 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 CD1DP15813 335 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 ZNF10P21506 573 aaPredicted RBP3.35□□□□□ -1.87
CLK1-213ENST00000492793 CASP3P42574 277 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 ERVK-16P61578 105 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 RBBP4Q09028 425 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 CBX3Q13185 183 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 GPR50Q13585 617 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 KIAA0141Q14154 515 aaPredicted RBP3.35□□□□□ -1.87
CLK1-213ENST00000492793 GIT2Q14161 759 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 SPHARQ15513 63 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 TAF1BQ53T94 588 aaPredicted RBP3.35□□□□□ -1.87
CLK1-213ENST00000492793 ZNF497Q6ZNH5 498 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 PRSS42Q7Z5A4 293 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 PEX5LQ8IYB4 626 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 NAT8LQ8N9F0 302 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 NEK11Q8NG66 645 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 C11orf45Q8TAV5 145 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 PRCCQ92733 491 aaPredicted RBP3.35□□□□□ -1.87
CLK1-213ENST00000492793 HAS2Q92819 552 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 BCL2L2Q92843 193 aaPredicted RBP3.35□□□□□ -1.87
CLK1-213ENST00000492793 EPSTI1Q96J88 318 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 CXorf58Q96LI9 332 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 LURAP1Q96LR2 239 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 MRPL9Q9BYD2 267 aaKnown RBP3.35□□□□□ -1.87
CLK1-213ENST00000492793 MED17Q9NVC6 651 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 NDE1Q9NXR1 346 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 PILRAQ9UKJ1 303 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 KCNK6Q9Y257 313 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 OR1A2Q9Y585 309 aa3.35□□□□□ -1.87
CLK1-213ENST00000492793 A0A0J9YWU9 116 aa3.34□□□□□ -1.87
CLK1-213ENST00000492793 TMEM129A0AVI4 362 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms