RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 C8orf44Q96CB5 159 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 LINGO1Q96FE5 620 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 CERS2Q96G23 380 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 VPS39Q96JC1 886 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 ZNF700Q9H0M5 742 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 OLAHQ9NV23 265 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 ARL15Q9NXU5 204 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 NSMCE4AQ9NXX6 385 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 STOX2Q9P2F5 926 aaPredicted RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 HECTD1Q9ULT8 2610 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 PCSK5Q92824 1860 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 LOC102723996A0A087X1L8 192 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 A0A1W2PQ72 361 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 KRT87PA6NCN2 255 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 CCDC188H7C350 402 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 H2AFYO75367 372 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 RASAL1O95294 804 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 COX6A1P12074 109 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 HPDP32754 393 aaPredicted RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 FOXL2P58012 376 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 NAE1Q13564 534 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 BTBD16Q32M84 506 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 MTFR2Q6P444 385 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 PAQR3Q6TCH7 311 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 FRA10AC1Q70Z53 315 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 ABHD13Q7L211 337 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 CPEB2Q7Z5Q1 589 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 SLC34A3Q8N130 599 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 NKAPQ8N5F7 415 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 SIRT6Q8N6T7 355 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 FAM98AQ8NCA5 519 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 OR9A4Q8NGU2 314 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 OR51Q1Q8NH59 317 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 BRIX1Q8TDN6 353 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 SLCO2A1Q92959 643 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 JMJD8Q96S16 334 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 NDNQ99608 321 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 ATG10Q9H0Y0 220 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 CLK4Q9HAZ1 481 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 KCNK13Q9HB14 408 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 ZBTB20Q9HC78 741 aaPredicted RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 STMN3Q9NZ72 180 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 TXNDC16Q9P2K2 825 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 RNF14Q9UBS8 474 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 PDE10AQ9Y233 779 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 VWA7Q9Y334 891 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 NEU2Q9Y3R4 380 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 SLC22A7Q9Y694 548 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 HIVEP3Q5T1R4 2406 aa8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 DIDO1Q9BTC0 2240 aaKnown RBP8.34□□□□□ -1.07
TNRC6B-208ENST00000489500 NAV2Q8IVL1 2488 aa8.34□□□□□ -1.08
TNRC6B-208ENST00000489500 LRRK2Q5S007 2527 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 A0A088AWK7 358 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 IGKV1-8A0A0C4DH67 115 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 TRBC2A0A5B9 178 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 A1L4Q6 167 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 SYNDIG1LA6NDD5 238 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 OR5H15A6NDH6 313 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 A8MUI8 341 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 MASP2O00187 686 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 PSMD12O00232 456 aaPredicted RBP8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 FOXS1O43638 330 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 OR1F1O43749 312 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 JRKO75564 520 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 KLHL18O94889 574 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 AHSGP02765 367 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 SERPIND1P05546 499 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 ZNF10P21506 573 aaPredicted RBP8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 BCL6P41182 706 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 XCR1P46094 333 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 TNFSF10P50591 281 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 CSNK1G2P78368 415 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 DR1Q01658 176 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 ZNF33BQ06732 778 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 MEP1AQ16819 746 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 LCE5AQ5TCM9 118 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 TMEM205Q6UW68 189 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 PLD3Q8IV08 490 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 TMEM151BQ8IW70 566 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 ZC3H7AQ8IWR0 971 aaKnown RBP8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 CNTN4Q8IWV2 1026 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 SLC5A8Q8N695 610 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 AMER3Q8N944 861 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 MFSD9Q8NBP5 474 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 TRPV3Q8NET8 790 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 NUP43Q8NFH3 380 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 ZCCHC10Q8TBK6 192 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 M1APQ8TC57 530 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 MZB1Q8WU39 189 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 ANKRD7Q92527 254 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 CDKL2Q92772 493 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 RELTQ969Z4 430 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 CFAP36Q96G28 342 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 OR1F2PQ96R84 312 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 CYTH2Q99418 400 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 LPAR4Q99677 370 aa8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 BARD1Q99728 777 aaKnown RBP8.33□□□□□ -1.08
TNRC6B-208ENST00000489500 AIF1LQ9BQI0 150 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms