RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FAM234BA2RU67 622 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 IQCF5A8MTL0 148 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 ZNF487B1APH4 448 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 KPNA5O15131 536 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 KIAA0513O60268 411 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 AOAHP28039 575 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 CD79BP40259 229 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 TAS2R40P59535 323 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 VLDLRP98155 873 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 KLHL30Q0D2K2 578 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 BMPR2Q13873 1038 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 TERF2Q15554 542 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 BEX5Q5H9J7 111 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 FAM120AOSQ5T036 256 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 NIPAL1Q6NVV3 410 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 HSDL2Q6YN16 418 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 SH2D5Q6ZV89 423 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.56□□□□□ -0.72
HDAC6-233ENST00000489352 STYXQ8WUJ0 223 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 SLC13A3Q8WWT9 602 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 CCDC138Q96M89 665 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 PANX2Q96RD6 677 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 KRT12Q99456 494 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 FERMT1Q9BQL6 677 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 SLC39A3Q9BRY0 314 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 L2HGDHQ9H9P8 463 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 SAE1Q9UBE0 346 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-233ENST00000489352 FEZ2Q9UHY8 353 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-233ENST00000489352 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 SLC22A7Q9Y694 548 aa10.56□□□□□ -0.72
HDAC6-233ENST00000489352 KCNE1BA0A087WTH5 132 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 MSTNO14793 375 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 PRKNO60260 465 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 DLX3O60479 287 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 STK10O94804 968 aaKnown RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 PROSCO94903 275 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 RCBTB2O95199 551 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 POU2F1P14859 743 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ZNF16P17020 682 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ITGA2P17301 1181 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ADRA1AP35348 466 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 HSD17B2P37059 387 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 CDKN1AP38936 164 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 PNLIPRP1P54315 467 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 OLR1P78380 273 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ARHGAP19Q14CB8 494 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 TOMM20Q15388 145 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 PTRHD1Q6GMV3 140 aaKnown RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 SCIMPQ6UWF3 145 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ZNF550Q7Z398 422 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 VN1R4Q7Z5H5 301 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ASPGQ86U10 573 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 KRT222Q8N1A0 295 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 DEPDC4Q8N2C3 294 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 LRRC25Q8N386 305 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 GABPB2Q8TAK5 448 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 THAP11Q96EK4 314 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 PANX3Q96QZ0 392 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 TBL1YQ9BQ87 522 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 FAM129AQ9BZQ8 928 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 GBA3Q9H227 469 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 RHBGQ9H310 441 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 NECTIN3Q9NQS3 549 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 TMEM184CQ9NVA4 438 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 AIPL1Q9NZN9 384 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 TSR3Q9UJK0 312 aaKnown RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 ZNF223Q9UK11 482 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-233ENST00000489352 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 WIF1Q9Y5W5 379 aa10.55□□□□□ -0.72
HDAC6-233ENST00000489352 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-233ENST00000489352 OR51F1A6NGY5 319 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 LRRC53A6NM62 1247 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 C16orf97H3BN30 126 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 SMAPO00193 183 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 SSX4O60224 188 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 ALX3O95076 343 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 CHRM3P20309 590 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 HRH2P25021 359 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 GRK3P35626 688 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 UGT2B10P36537 528 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 RPL21P46778 160 aaKnown RBP10.54□□□□□ -0.72
HDAC6-233ENST00000489352 GPR143P51810 404 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 DEFB134Q4QY38 66 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 PRAMEF20Q5VT98 475 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 VASNQ6EMK4 673 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 FAM166AQ6J272 317 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 LDB1Q86U70 411 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-233ENST00000489352 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 GCNT2Q8N0V5 402 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 PPFIBP2Q8ND30 876 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 OR5L2Q8NGL0 311 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 SLC44A1Q8WWI5 657 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 AKAP1Q92667 903 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDAC6-233ENST00000489352 P3H4Q92791 437 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 GCDHQ92947 438 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-233ENST00000489352 C1orf159Q96HA4 380 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms