RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 LRRC1Q9BTT6 524 aa17.87■□□□□ 0.45
CLIP2-206ENST00000487091 IGSF5Q9NSI5 407 aa17.87■□□□□ 0.45
CLIP2-206ENST00000487091 ACOT9Q9Y305 439 aa17.87■□□□□ 0.45
CLIP2-206ENST00000487091 MYO7BQ6PIF6 2116 aa17.87■□□□□ 0.45
CLIP2-206ENST00000487091 ESYT3A0FGR9 886 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 SYNDIG1LA6NDD5 238 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 PLA2G16P53816 162 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 MTTPP55157 894 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 KCNK10P57789 538 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 OC90Q02509 493 aaPredicted RBP17.86■□□□□ 0.45
CLIP2-206ENST00000487091 TGM3Q08188 693 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 CHIT1Q13231 466 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 RCN2Q14257 317 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 EFTUD2Q15029 972 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLIP2-206ENST00000487091 TERF2Q15554 542 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 WHAMMP3Q1A5X7 153 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 SPINK14Q6IE38 97 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 ZNF595Q8IYB9 648 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 ARMC10Q8N2F6 343 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 TMEM178AQ8NBL3 297 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 SRFBP1Q8NEF9 429 aaKnown RBP17.86■□□□□ 0.45
CLIP2-206ENST00000487091 RHEBL1Q8TAI7 183 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 UBTD2Q8WUN7 234 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 EXT2Q93063 718 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 UBE2E3Q969T4 207 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 PRTFDC1Q9NRG1 225 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 ANKRD10Q9NXR5 420 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 SEC14L3Q9UDX4 400 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 PPIEQ9UNP9 301 aaKnown RBP17.86■□□□□ 0.45
CLIP2-206ENST00000487091 MRPS33Q9Y291 106 aaKnown RBP17.86■□□□□ 0.45
CLIP2-206ENST00000487091 ASB1Q9Y576 335 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 UNC79Q9P2D8 2635 aa17.86■□□□□ 0.45
CLIP2-206ENST00000487091 A0A087X1B8 175 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 SYCE1LA8MT33 242 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 SUPT3HB4E1H0 165 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 K7EPI3 171 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 SUPT3HO75486 399 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 NEURL1O76050 574 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 URI1O94763 535 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-206ENST00000487091 SP1P08047 785 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 EEF1DP29692 281 aaKnown RBP17.85■□□□□ 0.45
CLIP2-206ENST00000487091 MLF1P58340 268 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.85■□□□□ 0.45
CLIP2-206ENST00000487091 MROH9Q5TGP6 573 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 CEP128Q6ZU80 1094 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 NXNL1Q96CM4 212 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 DEFB126Q9BYW3 111 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 ROGDIQ9GZN7 287 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 TRIM45Q9H8W5 580 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-206ENST00000487091 COPS7BQ9H9Q2 264 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-206ENST00000487091 PRDM7Q9NQW5 492 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 KLHL1Q9NR64 748 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 LRFN1Q9P244 771 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 OPTCQ9UBM4 332 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 DAPP1Q9UN19 280 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 CLDN16Q9Y5I7 305 aa17.85■□□□□ 0.45
CLIP2-206ENST00000487091 ASPDHA6ND91 283 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 A8MUA0 341 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 UBXN8O00124 270 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 CYR61O00622 381 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 UNC5CO95185 931 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 C2P06681 752 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 TPP2P29144 1249 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-206ENST00000487091 SERPINB1P30740 379 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 TRHRP34981 398 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-206ENST00000487091 PHBP35232 272 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 CLCN2P51788 898 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 LIM2P55344 173 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 PMP22Q01453 160 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 FAM83EQ2M2I3 478 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 ADNP2Q6IQ32 1131 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 SLC25A25Q6KCM7 469 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 RELL1Q8IUW5 271 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 LAS2Q8IYD9 372 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 CENPLQ8N0S6 344 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-206ENST00000487091 APCDD1LQ8NCL9 501 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 TMEM52Q8NDY8 209 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 B3GNT7Q8NFL0 401 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 ZNF473Q8WTR7 871 aaKnown RBP17.84■□□□□ 0.45
CLIP2-206ENST00000487091 C16orf45Q96MC5 204 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-206ENST00000487091 KCNC2Q96PR1 638 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 F2RL3Q96RI0 385 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 LYRM4Q9HD34 91 aa17.84■□□□□ 0.45
CLIP2-206ENST00000487091 HMX2A2RU54 273 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 FCHO1O14526 889 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 CTNSO60931 367 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MYO1DO94832 1006 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MLYCDO95822 493 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MTHFD2P13995 350 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 MSH2P43246 934 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 CYB561P49447 251 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 ST13P50502 369 aaKnown RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 GPR143P51810 404 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 HNRNPFP52597 415 aaKnown RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 RBPJQ06330 500 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 SLC13A2Q13183 592 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 ACAP2Q15057 778 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 ZRSR2Q15696 482 aaKnown RBP17.83■□□□□ 0.44
CLIP2-206ENST00000487091 TMEM35AQ53FP2 167 aa17.83■□□□□ 0.44
CLIP2-206ENST00000487091 KRTCAP3Q53RY4 240 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms