RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 C15orf41Q9Y2V0 281 aa13.91□□□□□ -0.18
POLR2J3-204ENST00000486319 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
POLR2J3-204ENST00000486319 NUP214P35658 2090 aaPredicted RBP13.91□□□□□ -0.18
POLR2J3-204ENST00000486319 PRSS51A0A1B0GVH4 220 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ARHGAP10A1A4S6 786 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 BTN3A3O00478 584 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 PLPP1O14494 284 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ARPC2O15144 300 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 NDUFS4O43181 175 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 LCMT2O60294 686 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 SCN2BO60939 215 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 TBX6O95947 436 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 CELA2BP08218 269 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 PIM1P11309 404 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 MYF5P13349 255 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 HOXB9P17482 250 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ATP6V1B2P21281 511 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 SLC7A1P30825 629 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 GRIA3P42263 894 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 DUSP3P51452 185 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 C2orf80Q0P641 193 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 SELPLGQ14242 412 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 MAP7Q14244 749 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 GPR18Q14330 331 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 TMEM35AQ53FP2 167 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 CCNYL2Q5T2Q4 361 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 WLSQ5T9L3 541 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ZNF425Q6IV72 752 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 DNAJC14Q6Y2X3 702 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 NUDT13Q86X67 352 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 GKN2Q86XP6 184 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 MSRB3Q8IXL7 192 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 RBM12BQ8IXT5 1001 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 PQLC1Q8N2U9 271 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 SDR16C5Q8N3Y7 309 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 TRPV3Q8NET8 790 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 JPH3Q8WXH2 748 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 PANX1Q96RD7 426 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 F2RL3Q96RI0 385 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 CPNE7Q9UBL6 633 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ADAM29Q9UKF5 820 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 AP1M2Q9Y6Q5 423 aa13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 ARID1BQ8NFD5 2236 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 COL5A1P20908 1838 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-204ENST00000486319 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 NVLO15381 856 aaKnown RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 CAPN5O15484 640 aaPredicted RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 GMNNO75496 209 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 LAMP1P11279 417 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 DDX5P17844 614 aaKnown RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 TPP2P29144 1249 aaPredicted RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 PTPN6P29350 595 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 ARFIP1P53367 373 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 TAS2R50P59544 299 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 UBE2IP63279 158 aaKnown RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 PDE7AQ13946 482 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 MUM1Q2TAK8 710 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 KIAA1614Q5VZ46 1190 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 FAM71E1Q6IPT2 247 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 RNF111Q6ZNA4 994 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 TMPRSS7Q7RTY8 843 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 CREB3L4Q8TEY5 395 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 ZNF583Q96ND8 569 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 CCDC115Q96NT0 180 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 CNTNAP3BQ96NU0 1288 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 CPPED1Q9BRF8 314 aaPredicted RBP13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 INPP5KQ9BT40 448 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 CNTNAP3Q9BZ76 1288 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 SH3BP4Q9P0V3 963 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 ANKMY1Q9P2S6 941 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 AP4S1Q9Y587 144 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 ENTPD2Q9Y5L3 495 aa13.9□□□□□ -0.19
POLR2J3-204ENST00000486319 EVPLLA8MZ36 301 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 RNASET2O00584 256 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 HAT1O14929 419 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 FKBP9O95302 570 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 GBAP04062 536 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 GPIP06744 558 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 FURINP09958 794 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 UMPSP11172 480 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 BSGP35613 385 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 BCL6P41182 706 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 CDKN2CP42773 168 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 MAPK12P53778 367 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 E2F1Q01094 437 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 NR0B2Q15466 257 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 ZIC1Q15915 447 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 GTDC1Q4AE62 458 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 C6orf132Q5T0Z8 1188 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 SPPL2CQ8IUH8 684 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 PLD3Q8IV08 490 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 NAGSQ8N159 534 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 NATD1Q8N6N6 113 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 AVL9Q8NBF6 648 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 MFSD9Q8NBP5 474 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 OR2T12Q8NG77 320 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms