RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TMPRSS11DO60235 418 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 DNAJB6O75190 326 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 RDH16O75452 317 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 STK17BO94768 372 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 ANXA4P09525 319 aaPredicted RBP16.64■□□□□ 0.25
CHMP3-207ENST00000485465 ACPPP15309 386 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 ITGAXP20702 1163 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 MAPK1P28482 360 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 RBMS1P29558 406 aaKnown RBP16.64■□□□□ 0.25
CHMP3-207ENST00000485465 RORAP35398 523 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 OR1D4P47884 311 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 SLAMF1Q13291 335 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 RUNX2Q13950 521 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 SLC9A5Q14940 896 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 IL23RQ5VWK5 629 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 MRM1Q6IN84 353 aaKnown RBP16.64■□□□□ 0.25
CHMP3-207ENST00000485465 IGF2-ASQ6U949 168 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 LRFN5Q96NI6 719 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 SPRY4Q9C004 299 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 ZNF304Q9HCX3 659 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 ASIC5Q9NY37 505 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 NOP53Q9NZM5 478 aaKnown RBP16.64■□□□□ 0.25
CHMP3-207ENST00000485465 FOXJ2Q9P0K8 574 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 DLGAP4Q9Y2H0 992 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 TMEM184BQ9Y519 407 aaPredicted RBP16.64■□□□□ 0.25
CHMP3-207ENST00000485465 MAU2Q9Y6X3 613 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 PIEZO1Q92508 2521 aa16.64■□□□□ 0.25
CHMP3-207ENST00000485465 CNOT1A5YKK6 2376 aaKnown RBP16.64■□□□□ 0.25
CHMP3-207ENST00000485465 GNG14A0A1W2PPG7 69 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 E9PBE3 544 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 MEN1O00255 615 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 UBDO15205 165 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 KLHL41O60662 606 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 ALDOCP09972 364 aaKnown RBP16.63■□□□□ 0.25
CHMP3-207ENST00000485465 FAM58BPP0C7Q3 252 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 PRPS2P11908 318 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 BCKDHAP12694 445 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 MAPK12P53778 367 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 TRA2BP62995 288 aaKnown RBP16.63■□□□□ 0.25
CHMP3-207ENST00000485465 OLR1P78380 273 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 ABHD18Q0P651 414 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 ZNF385CQ66K41 422 aaPredicted RBP16.63■□□□□ 0.25
CHMP3-207ENST00000485465 TMEM198Q66K66 360 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 DSELQ8IZU8 1212 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 CA13Q8N1Q1 262 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 OR5T3Q8NGG3 340 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.63■□□□□ 0.25
CHMP3-207ENST00000485465 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 LYARQ9NX58 379 aaKnown RBP16.63■□□□□ 0.25
CHMP3-207ENST00000485465 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 WASF3Q9UPY6 502 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 ASB4Q9Y574 426 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 PCDHGA7Q9Y5G6 932 aa16.63■□□□□ 0.25
CHMP3-207ENST00000485465 CHST10O43529 356 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 DLGAP3O95886 979 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 ONECUT2O95948 504 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 SDC1P18827 310 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 FBLP22087 321 aaKnown RBP16.62■□□□□ 0.25
CHMP3-207ENST00000485465 TACR1P25103 407 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 SLC5A2P31639 672 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 DIO3P55073 304 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 LIM2P55344 173 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 DCDP81605 110 aaKnown RBP16.62■□□□□ 0.25
CHMP3-207ENST00000485465 MAT1AQ00266 395 aaKnown RBP16.62■□□□□ 0.25
CHMP3-207ENST00000485465 DSG2Q14126 1118 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 RTP5Q14D33 572 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 NKAIN1Q4KMZ8 207 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 METTL21CQ5VZV1 264 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 GPR180Q86V85 440 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 LIX1Q8N485 282 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 GALNT6Q8NCL4 622 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 C16orf78Q8WTQ4 265 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 COL26A1Q96A83 441 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 TM4SF18Q96CE8 201 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 MAPKAP1Q9BPZ7 522 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 DPH2Q9BQC3 489 aaPredicted RBP16.62■□□□□ 0.25
CHMP3-207ENST00000485465 KCMF1Q9P0J7 381 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 HCN3Q9P1Z3 774 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 FBXW2Q9UKT8 454 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 DAPP1Q9UN19 280 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 G3BP2Q9UN86 482 aaKnown RBP16.62■□□□□ 0.25
CHMP3-207ENST00000485465 TRIM33Q9UPN9 1127 aa16.62■□□□□ 0.25
CHMP3-207ENST00000485465 CDRT15L2A8MXV6 281 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 DXOO77932 396 aaKnown RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 KLK3P07288 261 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 PIM1P11309 404 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 G6PDP11413 515 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 AGXTP21549 392 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 GSTM5P46439 218 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 HNRNPH2P55795 449 aaKnown RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 CBX1P83916 185 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 ZNF763Q0D2J5 394 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 GSTA3Q16772 222 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 SYT16Q17RD7 645 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 ARHGAP40Q5TG30 622 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 GKAP1Q5VSY0 366 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 C6orf15Q6UXA7 325 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 SHISA5Q8N114 240 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 MARK4Q96L34 752 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms