RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 DND1Q8IYX4 353 aaKnown RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ZNF444Q8N0Y2 327 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 SLC43A2Q8N370 569 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 MRPL43Q8N983 215 aaKnown RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 NEK11Q8NG66 645 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 OR5T2Q8NGG2 359 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 EXOC6Q8TAG9 804 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 MRGPRDQ8TDS7 321 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 DNASE2BQ8WZ79 361 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ZNF300Q96RE9 604 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 PKP2Q99959 881 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 PAPOLGQ9BWT3 736 aaKnown RBP4.4□□□□□ -1.71
SRRM1-213ENST00000485441 HOXD1Q9GZZ0 328 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 HSD3B7Q9H2F3 369 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 ZNF665Q9H7R5 613 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 DNPEPQ9ULA0 475 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 GAB2Q9UQC2 676 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 FGD5Q6ZNL6 1462 aa4.4□□□□□ -1.71
SRRM1-213ENST00000485441 RAD54L2Q9Y4B4 1467 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 SLC1A7O00341 560 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 PCP11498 1178 aaKnown RBP4.39□□□□□ -1.71
SRRM1-213ENST00000485441 CPA3P15088 417 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 ANPEPP15144 967 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 ACP1P24666 158 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 CTNNA2P26232 953 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 OPRL1P41146 370 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 SLC1A3P43003 542 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 BACE1P56817 501 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 TMEM30BQ3MIR4 351 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 PWWP2BQ6NUJ5 590 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 Q6ZVQ6 151 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 CACUL1Q86Y37 369 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 OR13C5Q8NGS8 318 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 OR4A16Q8NH70 328 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 PRCCQ92733 491 aaPredicted RBP4.39□□□□□ -1.71
SRRM1-213ENST00000485441 MRPL38Q96DV4 380 aaKnown RBP4.39□□□□□ -1.71
SRRM1-213ENST00000485441 MAGED4Q96JG8 741 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 ERGIC2Q96RQ1 377 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 OVOL2Q9BRP0 275 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 TEX13AQ9BXU3 409 aaPredicted RBP4.39□□□□□ -1.71
SRRM1-213ENST00000485441 SYTL2Q9HCH5 934 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 PLCXD1Q9NUJ7 323 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 WWOXQ9NZC7 414 aa4.39□□□□□ -1.71
SRRM1-213ENST00000485441 DBF4Q9UBU7 674 aaPredicted RBP4.39□□□□□ -1.71
SRRM1-213ENST00000485441 MACROD2A1Z1Q3 448 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 PRR23AA6NEV1 266 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 ANHXE9PGG2 379 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 FGF19O95750 216 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 TXNDC12O95881 172 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 GAS8O95995 478 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 SLC4A1P02730 911 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 AREGP15514 252 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 C4BPBP20851 252 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 GLRA1P23415 457 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 CLK1P49759 484 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 HNRNPFP52597 415 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 IRX4P78413 519 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 HNRNPDQ14103 355 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 GAMTQ14353 236 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 MEF2DQ14814 521 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 C3AR1Q16581 482 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 HERC4Q5GLZ8 1057 aaPredicted RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 PRAMEF7Q5VXH5 474 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 SNRNP48Q6IEG0 339 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 CAPN13Q6MZZ7 669 aaPredicted RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 RFPL4BQ6ZWI9 263 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 NLRP14Q86W24 1093 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 ELMOD2Q8IZ81 293 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 HDDC3Q8N4P3 179 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 CCNYQ8ND76 341 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 TMEM185AQ8NFB2 350 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 C8orf46Q8TAG6 207 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 FBXO17Q96EF6 278 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 MRPL53Q96EL3 112 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 GPR137Q96N19 417 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 KRT12Q99456 494 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 S1PR3Q99500 378 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 WDR13Q9H1Z4 485 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 MTIF3Q9H2K0 278 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 DDX28Q9NUL7 540 aaKnown RBP4.38□□□□□ -1.71
SRRM1-213ENST00000485441 KCNN3Q9UGI6 736 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 PPP1R3CQ9UQK1 317 aa4.38□□□□□ -1.71
SRRM1-213ENST00000485441 SURF4O15260 269 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 PRPSAP2O60256 369 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 ANGPTL1O95841 491 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 CXCL10P02778 98 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 CT45A8P0DMV1 189 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 CT45A9P0DMV2 189 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 SELEP16581 610 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 IL10P22301 178 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 CD86P42081 329 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 ATXN3P54252 364 aaPredicted RBP4.37□□□□□ -1.71
SRRM1-213ENST00000485441 SRP54P61011 504 aaKnown RBP4.37□□□□□ -1.71
SRRM1-213ENST00000485441 WASHC5Q12768 1159 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 CT45A2Q5DJT8 189 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 LYPLAL1Q5VWZ2 237 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 TMEM64Q6YI46 380 aa4.37□□□□□ -1.71
SRRM1-213ENST00000485441 MIER3Q7Z3K6 550 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms