RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 HMBOX1Q6NT76 420 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 ASPGQ86U10 573 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 PDSS2Q86YH6 399 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 ARL14Q8N4G2 192 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 OR4A15Q8NGL6 344 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 OR10G6Q8NH81 332 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 BAHD1Q8TBE0 780 aaPredicted RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 FAM110BQ8TC76 370 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 POP5Q969H6 163 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 CIDECQ96AQ7 238 aaPredicted RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 ZNF184Q99676 751 aaPredicted RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 MACROD1Q9BQ69 325 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 C17orf62Q9BQA9 187 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 MIEF1Q9NQG6 463 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 EVA1BQ9NVM1 165 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 TAS2R9Q9NYW1 312 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 EHD3Q9NZN3 535 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 ANAPC2Q9UJX6 822 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CNOT11Q9UKZ1 510 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CORO2BQ9UQ03 480 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 A0A0J9YY10 115 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 A0A1W2PRB8 838 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 LMO7DNF2Z398 122 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 ERI3O43414 337 aaKnown RBP13.35□□□□□ -0.27
CLK3-204ENST00000483723 GMNNO75496 209 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 CREG1O75629 220 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 C6orf47O95873 294 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 FAM58BPP0C7Q3 252 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 TDGF1P13385 188 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 SSR2P43308 183 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 MVDP53602 400 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 HNRNPKP61978 463 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLK3-204ENST00000483723 GAB1Q13480 694 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 SLC9A5Q14940 896 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 TBCELQ5QJ74 424 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 ERICH5Q6P6B1 374 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 TRIM40Q6P9F5 258 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 OOSP2Q86WS3 158 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 PTOV1Q86YD1 416 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 ACOT4Q8N9L9 421 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 CATSPER1Q8NEC5 780 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 GAL3ST3Q96A11 431 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 NAF1Q96HR8 494 aaKnown RBP13.35□□□□□ -0.27
CLK3-204ENST00000483723 EPS8L2Q9H6S3 715 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 OLAHQ9NV23 265 aa13.35□□□□□ -0.27
CLK3-204ENST00000483723 TEX10Q9NXF1 929 aaPredicted RBP13.35□□□□□ -0.27
CLK3-204ENST00000483723 TP53BP1Q12888 1972 aaPredicted RBP13.34□□□□□ -0.27
CLK3-204ENST00000483723 B4DGG1 531 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 GSTA4O15217 222 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
CLK3-204ENST00000483723 AQP9O43315 295 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 TIPRLO75663 272 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 SOX11P35716 441 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 CSNK1EP49674 416 aaKnown RBP13.34□□□□□ -0.27
CLK3-204ENST00000483723 RGS1Q08116 209 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 TGM3Q08188 693 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 SLAMF1Q13291 335 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 MLC1Q15049 377 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 ADRM1Q16186 407 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 TLDC1Q6P9B6 456 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 IZUMO2Q6UXV1 221 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 RNF44Q7L0R7 432 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 ZZZ3Q8IYH5 903 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 ANKFN1Q8N957 763 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
CLK3-204ENST00000483723 OR5P2Q8WZ92 322 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 RSC1A1Q92681 617 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 ZNF570Q96NI8 536 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 FCRL4Q96PJ5 515 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 ABCG4Q9H172 646 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 ERVMER34-1Q9H9K5 563 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 DCAF13Q9NV06 445 aaKnown RBP13.34□□□□□ -0.27
CLK3-204ENST00000483723 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 POMT2Q9UKY4 750 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 AURKCQ9UQB9 309 aa13.34□□□□□ -0.27
CLK3-204ENST00000483723 A0A0C4DFX4 3053 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 A0A0G2JN53 185 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 LILRA5A6NI73 299 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 GUCY1B2O75343 617 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 PIAS2O75928 621 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 STATHP02808 62 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 FCGR1AP12314 374 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 MAZP56270 477 aaKnown RBP13.33□□□□□ -0.27
CLK3-204ENST00000483723 VEZF1Q14119 521 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 RGNQ15493 299 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 VMACQ2NL98 169 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 WDR5BQ86VZ2 330 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 TRIML2Q8N7C3 387 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 KCT2Q8NC54 265 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 OR52N2Q8NGI0 321 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 OR8K5Q8NH50 307 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 PSMA8Q8TAA3 256 aa13.33□□□□□ -0.27
CLK3-204ENST00000483723 NETO1Q8TDF5 533 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms