RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 A0A1W2PP18 115 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 DYTNA2CJ06 578 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 GABRR3A8MPY1 467 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 B2RBV5 119 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 FBP2O00757 339 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 AIM2O14862 343 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 SCAMP2O15127 329 aaKnown RBP16.66■□□□□ 0.26
UPF3A-206ENST00000480362 B3GALT2O43825 422 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 GALR3O60755 368 aaPredicted RBP16.66■□□□□ 0.26
UPF3A-206ENST00000480362 DNAJB6O75190 326 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 GUCY1B2O75343 617 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 MED26O95402 600 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 IL6P05231 212 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 COX7A2P14406 83 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 S100A3P33764 101 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 HPCAL1P37235 193 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 MNAT1P51948 309 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 EMP3P54852 163 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 HNRNPH2P55795 449 aaKnown RBP16.66■□□□□ 0.26
UPF3A-206ENST00000480362 ITGA1P56199 1179 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 KLC1Q07866 573 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 RUNX2Q13950 521 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 UGT8Q16880 541 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 MMEL1Q495T6 779 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 TIGD2Q4W5G0 525 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 SPANXN4Q5MJ08 99 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 RBM44Q6ZP01 1051 aaKnown RBP16.66■□□□□ 0.26
UPF3A-206ENST00000480362 IKBIPQ70UQ0 350 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
UPF3A-206ENST00000480362 PDSS2Q86YH6 399 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 OR7A2PQ8NGA2 310 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 STARD8Q92502 1023 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 RCN3Q96D15 328 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 NPAS2Q99743 824 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 MAPKAP1Q9BPZ7 522 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 RTKNQ9BST9 563 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 ATP6V1HQ9UI12 483 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 NDUFAF1Q9Y375 327 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 ADAMTS20P59510 1910 aa16.66■□□□□ 0.26
UPF3A-206ENST00000480362 A0A0A6YYC8 382 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 ZNF860A6NHJ4 632 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 BBIP1A8MTZ0 92 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 I3L1I5 382 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 ANGPT2O15123 496 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 CFLARO15519 480 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 FOXS1O43638 330 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 HNRNPCL1O60812 293 aaKnown RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 FURINP09958 794 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 CSTF2P33240 577 aaKnown RBP eCLIP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 RPL3P39023 403 aaKnown RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 PDX1P52945 283 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 LIMK1P53667 647 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 NCALDP61601 193 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 MXRA7P84157 204 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 NHLH1Q02575 133 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 SRSF11Q05519 484 aaKnown RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 FOXM1Q08050 763 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 FAM53BQ14153 422 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 C16orf72Q14CZ0 275 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 HEPACAMQ14CZ8 416 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 TLR1Q15399 786 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 MUM1Q2TAK8 710 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 FAM214AQ32MH5 1076 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 REP15Q6BDI9 236 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 ANKRD26P1Q6NSI1 321 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 TLDC1Q6P9B6 456 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 RINLQ6ZS11 566 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 GPR180Q86V85 440 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 MMP21Q8N119 569 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 DEFB124Q8NES8 71 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 OR9A4Q8NGU2 314 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 SLC7A6OSQ96CW6 309 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 OR6C1Q96RD1 312 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 PRPF18Q99633 342 aaKnown RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 EFCAB1Q9HAE3 211 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 CUTCQ9NTM9 273 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 OCIAD1Q9NX40 245 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 TEX10Q9NXF1 929 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 TOR4AQ9NXH8 423 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 SIDT1Q9NXL6 827 aaKnown RBP16.65■□□□□ 0.26
UPF3A-206ENST00000480362 KCMF1Q9P0J7 381 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 ATG4BQ9Y4P1 393 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 PCDHGA1Q9Y5H4 931 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 OTOGLQ3ZCN5 2332 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 SCN3AQ9NY46 2000 aa16.65■□□□□ 0.26
UPF3A-206ENST00000480362 A0A1W2PR48 441 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 ASPDHA6ND91 283 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 EFCAB7A8K855 629 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 SGK494L7N484 410 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 MRASO14807 208 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 PROM1O43490 865 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 PGRP06401 933 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 PIM1P11309 404 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-206ENST00000480362 DDCP20711 480 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 ALDH9A1P49189 494 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 RASSF2P50749 326 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 PHC1P78364 1004 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 OLR1P78380 273 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 INSM1Q01101 510 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms