RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SPDYAQ5MJ70 313 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 ACSM2BQ68CK6 577 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 FAM198BQ6UWH4 519 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 ZNF793Q6ZN11 406 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 COMMD6Q7Z4G1 85 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 C1orf52Q8N6N3 182 aaKnown RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 AMER3Q8N944 861 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 OR2T11Q8NH01 316 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 PIWIL2Q8TC59 973 aaKnown RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 SMIM10Q96HG1 83 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 QRFPRQ96P65 431 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 SERINC2Q96SA4 455 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 DPH2Q9BQC3 489 aaPredicted RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 ZNF717Q9BY31 904 aaPredicted RBP14.51□□□□□ -0.09
SEC13-215ENST00000477547 NUF2Q9BZD4 464 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 SPRY4Q9C004 299 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 CHST8Q9H2A9 424 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 PRORYQ9H606 182 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 CCDC134Q9H6E4 229 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 ZNF304Q9HCX3 659 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 LHX9Q9NQ69 397 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 PFDN4Q9NQP4 134 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 ZNF462Q96JM2 2506 aa14.51□□□□□ -0.09
SEC13-215ENST00000477547 CFAP46Q8IYW2 2715 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 SLCO1B7G3V0H7 640 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 POLR3GO15318 223 aaPredicted RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 HDAC3O15379 428 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 EDF1O60869 148 aaKnown RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 SCELO95171 688 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 CCNYL3P0C7X3 344 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 HIST1H1TP22492 207 aaPredicted RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 ATP5A1P25705 553 aaKnown RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 TSFMP43897 325 aaKnown RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 HK2P52789 917 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 ARFIP1P53367 373 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 GYS2P54840 703 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 MAT1AQ00266 395 aaKnown RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 TBL3Q12788 808 aaKnown RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 OR4C11Q6IEV9 310 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 COX15Q7KZN9 410 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 CACNA2D3Q8IZS8 1091 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 METTL4Q8N3J2 472 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 OR5T3Q8NGG3 340 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 FKBP10Q96AY3 582 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 CCT7Q99832 543 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 RBCK1Q9BYM8 510 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 PRDM7Q9NQW5 492 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 RIC8BQ9NVN3 520 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 FAM53CQ9NYF3 392 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 AHSPQ9NZD4 102 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 IFT80Q9P2H3 777 aaPredicted RBP14.5□□□□□ -0.09
SEC13-215ENST00000477547 CTSFQ9UBX1 484 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 CCL27Q9Y4X3 112 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 CROCCQ5TZA2 2017 aa14.5□□□□□ -0.09
SEC13-215ENST00000477547 ATP6AP2A0A1C7CYW4 349 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 ARHGAP10A1A4S6 786 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 EEDO75530 441 aaKnown RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 ATP6AP2O75787 350 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 VIMP08670 466 aaKnown RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 PIM1P11309 404 aaPredicted RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 PRPH2P23942 346 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 TIA1P31483 386 aaKnown RBP eCLIP14.49□□□□□ -0.09
SEC13-215ENST00000477547 BSGP35613 385 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 STAT5AP42229 794 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 RPL38P63173 70 aaKnown RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 SYT16Q17RD7 645 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 GALNTL6Q49A17 601 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 LCN10Q6JVE6 187 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 FAM199XQ6PEV8 388 aaPredicted RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 PAGE2Q7Z2X7 111 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 WDR75Q8IWA0 830 aaKnown RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 IL22RA1Q8N6P7 574 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 ACOT4Q8N9L9 421 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 CT55Q8WUE5 264 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 TUBGCP3Q96CW5 907 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 APIPQ96GX9 242 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 C3orf30Q96M34 536 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 YIPF2Q9BWQ6 316 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 EBPLQ9BY08 206 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 LRTM1Q9HBL6 345 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 SLC22A11Q9NSA0 550 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 WDR70Q9NW82 654 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 TRPC4Q9UBN4 977 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 VTI1BQ9UEU0 232 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 GIMAP2Q9UG22 337 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 GPN3Q9UHW5 284 aaPredicted RBP14.49□□□□□ -0.09
SEC13-215ENST00000477547 PADI1Q9ULC6 663 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 MAP4K5Q9Y4K4 846 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 USH1CQ9Y6N9 552 aa14.49□□□□□ -0.09
SEC13-215ENST00000477547 A0A0A6YYD5 115 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 TRPC5OSA6NMA1 111 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 NPIPB8E9PQR5 432 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 LSM1O15116 133 aaKnown RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 TLX3O43711 291 aaPredicted RBP14.48□□□□□ -0.09
SEC13-215ENST00000477547 PCDH7O60245 1069 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 GBAP04062 536 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 NCF4Q15080 339 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 ATP6AP1LQ52LC2 224 aa14.48□□□□□ -0.09
SEC13-215ENST00000477547 CYP20A1Q6UW02 462 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms