RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ISL2Q96A47 359 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 UTP23Q9BRU9 249 aaKnown RBP9.6□□□□□ -0.87
CCM2-208ENST00000476594 KLHL31Q9H511 634 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 ZBTB20Q9HC78 741 aaPredicted RBP9.6□□□□□ -0.87
CCM2-208ENST00000476594 PRTFDC1Q9NRG1 225 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 ASF1BQ9NVP2 202 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 MS4A12Q9NXJ0 267 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 CPSF2Q9P2I0 782 aaKnown RBP9.6□□□□□ -0.87
CCM2-208ENST00000476594 NFU1Q9UMS0 254 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 PRRC2CQ9Y520 2896 aaKnown RBP9.6□□□□□ -0.87
CCM2-208ENST00000476594 DOCK10Q96BY6 2186 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 SCN3AQ9NY46 2000 aa9.6□□□□□ -0.87
CCM2-208ENST00000476594 ASH1LQ9NR48 2969 aaKnown RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 IGHV3-20A0A0C4DH32 117 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 IQANK1A0A1B0GTG1 560 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 TCRBV16S1A1N1A0A5B0 115 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 ANKUB1A6NFN9 424 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 STX16O14662 325 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 EDN3P14138 238 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 COX7A2P14406 83 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 TAC1P20366 129 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 PPP2R1BP30154 601 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 TLX1P31314 330 aaPredicted RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 HNRNPH1P31943 449 aaKnown RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 PIK3CBP42338 1070 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 SSR2P43308 183 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 CLCN2P51788 898 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 SLC26A5P58743 744 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 IRF9Q00978 393 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 STX4Q12846 297 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 BIKQ13323 160 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 GTF2H2Q13888 395 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 SERTAD2Q14140 314 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 E2F2Q14209 437 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 PCBP2Q15366 365 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCM2-208ENST00000476594 NR6A1Q15406 480 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 TECRLQ5HYJ1 363 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 ACER2Q5QJU3 275 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 GTF2H2CQ6P1K8 395 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 ABHD17CQ6PCB6 329 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 LAS2Q8IYD9 372 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 TMEM178AQ8NBL3 297 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 ST6GALNAC3Q8NDV1 305 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 OR7G3Q8NG95 312 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 ZNF473Q8WTR7 871 aaKnown RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 PSMF1Q92530 271 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 DAZLQ92904 295 aaKnown RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 TSLPQ969D9 159 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 MRPL57Q9BQC6 102 aaKnown RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 MS4A8Q9BY19 250 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 MRPL46Q9H2W6 279 aaKnown RBP9.59□□□□□ -0.87
CCM2-208ENST00000476594 LYRM4Q9HD34 91 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 OLAHQ9NV23 265 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 DAPP1Q9UN19 280 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 TSC22D4Q9Y3Q8 395 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 PCDHGB6Q9Y5F9 930 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 LRRK2Q5S007 2527 aa9.59□□□□□ -0.87
CCM2-208ENST00000476594 A0A0G2JN53 185 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 TCP11X1B4DZS4 312 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 TRIM49D1C9J1S8 452 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 KLK8O60259 260 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 PRAMEF2O60811 474 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 RASAL1O95294 804 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 CLDN9O95484 217 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 DDAH2O95865 285 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 WDPCPO95876 746 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 B3GALT4O96024 378 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 RHOXF2BP0C7M4 288 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 MTHFD2P13995 350 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 CD46P15529 392 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 PTX3P26022 381 aaPredicted RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 CERS1P27544 350 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 ECHS1P30084 290 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 BUD31P41223 144 aaPredicted RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 MAGEA12P43365 314 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 CCNG1P51959 295 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 PER3P56645 1201 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 SNRPNP63162 240 aaKnown RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 OC90Q02509 493 aaPredicted RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 DDX39BQ13838 428 aaKnown RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 PRR30Q53SZ7 412 aaPredicted RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 KHDRBS2Q5VWX1 349 aaKnown RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 TTC19Q6DKK2 380 aaPredicted RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 H3F3CQ6NXT2 135 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 TMEM132CQ8N3T6 1108 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 PTGR2Q8N8N7 351 aaPredicted RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 EIF1ADQ8N9N8 165 aaKnown RBP9.58□□□□□ -0.88
CCM2-208ENST00000476594 FAM47BQ8NA70 645 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 DNAJB8Q8NHS0 232 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 PRR7Q8TB68 274 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 FAR1Q8WVX9 515 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.58□□□□□ -0.885e-8■■■■■ 65.3
CCM2-208ENST00000476594 TMEM125Q96AQ2 219 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 RGMAQ96B86 450 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 VMP1Q96GC9 406 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 F2RL3Q96RI0 385 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 RHOXF2Q9BQY4 288 aa9.58□□□□□ -0.88
CCM2-208ENST00000476594 MESP1Q9BRJ9 268 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms