RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GLCCI1Q86VQ1 547 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ADHFE1Q8IWW8 467 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ST13P5Q8NFI4 369 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 IPMKQ8NFU5 416 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 OR4F15Q8NGB8 312 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 FANK1Q8TC84 345 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GTF3C2Q8WUA4 911 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 SELENOMQ8WWX9 145 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 UPF1Q92900 1129 aaKnown RBP eCLIP3.92□□□□□ -1.78
USP16-205ENST00000474835 RGMAQ96B86 450 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 KIF12Q96FN5 646 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SEC22CQ9BRL7 303 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PLEKHA5Q9HAU0 1116 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 C14orf119Q9NWQ9 140 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 KIF17Q9P2E2 1029 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 MBD2Q9UBB5 411 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CEP192Q8TEP8 1941 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 IFITM10A6NMD0 228 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 LINC00587B1AMM8 73 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PRAMEF26H0Y7S4 382 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GPR171O14626 319 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GREM1O60565 184 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 EGFP01133 1207 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CD79AP11912 226 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 DDCP20711 480 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 AGAP20933 346 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ALDH4A1P30038 563 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 HOXA11P31270 313 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 HSPA7P48741 367 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CCT3P49368 545 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 ARSDP51689 593 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 RABGGTBP53611 331 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 MAPK10P53779 464 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GPR85P60893 370 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CAMK1Q14012 370 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ZNF813Q6ZN06 617 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 KRT74Q7RTS7 529 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 UMODL1-AS1Q8N2C9 162 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 OR11G2Q8NGC1 345 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SLC13A3Q8WWT9 602 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SLC9A6Q92581 669 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GTF3AQ92664 365 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 ZNF669Q96BR6 464 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 CCDC120Q96HB5 630 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SLC38A2Q96QD8 506 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 OR2M2Q96R28 347 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 TBL1YQ9BQ87 522 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 MRPL45Q9BRJ2 306 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 TMEM175Q9BSA9 504 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GLIS2Q9BZE0 524 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 GSX2Q9BZM3 304 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 DHX35Q9H5Z1 703 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 CCDC86Q9H6F5 360 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 RANBP3Q9H6Z4 567 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 EHMT1Q9H9B1 1298 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 FAM49BQ9NUQ9 324 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 TRPS1Q9UHF7 1281 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 AGTPBP1Q9UPW5 1226 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 HRH3Q9Y5N1 445 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 LTBP3Q9NS15 1303 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 NUP214P35658 2090 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 A0A1B0GTI1 187 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CARNS1A5YM72 827 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PDZK1P1A8MUH7 402 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 LACTBL1A8MY62 500 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 HAS3O00219 553 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 TNFRSF10BO14763 440 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 TBX19O60806 448 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 RDH16O75452 317 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 EFEMP2O95967 443 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CST1P01037 141 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 IL6P05231 212 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 UBA1P22314 1058 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 ATP5C1P36542 298 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 ATP5OP48047 213 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SLC6A12P48065 614 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GPR143P51810 404 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 MAT1AQ00266 395 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 P2RY14Q15391 338 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ZIK1Q3SY52 487 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 RFTN2Q52LD8 501 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 JADE1Q6IE81 842 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 TYW3Q6IPR3 259 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 RTL4Q6ZR62 310 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 UBE2R2Q712K3 238 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 GPRIN1Q7Z2K8 1008 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 FGD2Q7Z6J4 655 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ZBTB46Q86UZ6 589 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 ZNF655Q8N720 491 aaPredicted RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 L3MBTL4Q8NA19 623 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CD200R1Q8TD46 325 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 RAD51AP1Q96B01 352 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 FOPNLQ96NB1 174 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 KCNC2Q96PR1 638 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 COQ7Q99807 217 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 NUAK2Q9H093 628 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SLC28A3Q9HAS3 691 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GLOD4Q9HC38 313 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CRTAC1Q9NQ79 661 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 RPRD1BQ9NQG5 326 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms