RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 ATL1Q8WXF7 558 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 ASB15Q8WXK1 588 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 MAGOHBQ96A72 148 aaKnown RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 FBXL8Q96CD0 374 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 SIGLEC10Q96LC7 697 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 NAPGQ99747 312 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 AIF1LQ9BQI0 150 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 PNPLA3Q9NST1 481 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 DEPPQ9NTK1 212 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 KCNN3Q9UGI6 736 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 ZNF223Q9UK11 482 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 FLNAP21333 2647 aaKnown RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 MPDZO75970 2070 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 PINLYPA6NC86 204 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 G3V3Y1 287 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-209ENST00000474647 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-209ENST00000474647 OR2J2O76002 312 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 HOXD4P09016 255 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-209ENST00000474647 CD99P14209 185 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 PGAM1P18669 254 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 MAGEA3P43357 314 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 IST1P53990 364 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 BTN3A2P78410 334 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 IL20RBQ6UXL0 311 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 CLYBLQ8N0X4 340 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 TRPV3Q8NET8 790 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 CCT6BQ92526 530 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 FAR2Q96K12 515 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 PELI2Q9HAT8 420 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 PRTFDC1Q9NRG1 225 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 SLC17A6Q9P2U8 582 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 YARS2Q9Y2Z4 477 aaKnown RBP13.02□□□□□ -0.33
CCDC78-209ENST00000474647 MMACHCQ9Y4U1 282 aa13.02□□□□□ -0.33
CCDC78-209ENST00000474647 ACANP16112 2415 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 A0A0G2JMM0 328 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 A0A1W2PPB8 328 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 FIGNL2A6NMB9 653 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 KIR3DP1A8MWS1 328 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 ESPNB1AK53 854 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 BANF1O75531 89 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 GABRB3P28472 473 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 TERF2Q15554 542 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 CCDC137Q6PK04 289 aaKnown RBP13.01□□□□□ -0.33
CCDC78-209ENST00000474647 NXPE4Q6UWF7 544 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 SYT10Q6XYQ8 523 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 CLNKQ7Z7G1 428 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 THOC6Q86W42 341 aaKnown RBP13.01□□□□□ -0.33
CCDC78-209ENST00000474647 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC78-209ENST00000474647 NAT8LQ8N9F0 302 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 FAM47BQ8NA70 645 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 OR2M7Q8NG81 312 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 SMC6Q96SB8 1091 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 TTTY12Q9BZ98 90 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 CLK4Q9HAZ1 481 aaKnown RBP13.01□□□□□ -0.33
CCDC78-209ENST00000474647 PPANQ9NQ55 473 aaKnown RBP13.01□□□□□ -0.33
CCDC78-209ENST00000474647 SNX12Q9UMY4 172 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 LIPGQ9Y5X9 500 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 ABCA4P78363 2273 aa13.01□□□□□ -0.33
CCDC78-209ENST00000474647 TGFBR3LH3BV60 316 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 WWP2O00308 870 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 CES2O00748 559 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 ERI3O43414 337 aaKnown RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 KLK8O60259 260 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF500O60304 480 aaPredicted RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 ZFAND5O76080 213 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 OR6B1O95007 311 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 AHSGP02765 367 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SERPINA6P08185 405 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 ENO2P09104 434 aaPredicted RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 SMIM10L1P0DMW3 83 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 ACVR2AP27037 513 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 CASQ1P31415 396 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SOX3P41225 446 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 HNRNPFP52597 415 aaKnown RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 STXBP1P61764 594 aaKnown RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 BMPR2Q13873 1038 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 GXYLT1Q4G148 440 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SBSNQ6UWP8 590 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 KIAA0408Q6ZU52 694 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SLC22A16Q86VW1 577 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SCUBE1Q8IWY4 988 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 PPIL6Q8IXY8 311 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 TMEM52Q8NDY8 209 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 CREB3L4Q8TEY5 395 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 GAL3ST3Q96A11 431 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SMIM10Q96HG1 83 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 MS4A14Q96JA4 679 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 OSBPL9Q96SU4 736 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 EGFL8Q99944 293 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 AICDAQ9GZX7 198 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 ADAP2Q9NPF8 381 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms