RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SV2AQ7L0J3 742 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PEX26Q7Z412 305 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 P4HA3Q7Z4N8 544 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ABHD12BQ7Z5M8 362 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 UBQLNLQ8IYU4 475 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ZNF843Q8N446 348 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CISD2Q8N5K1 135 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ACBD4Q8NC06 268 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM116Q8NCL8 245 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ADPRHL1Q8NDY3 354 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 BEST2Q8NFU1 509 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 OR2D3Q8NGH3 330 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NANPQ8TBE9 248 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FNDC8Q8TC99 324 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GRHL3Q8TE85 626 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NRG4Q8WWG1 115 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 YIPF5Q969M3 257 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TAMM41Q96BW9 452 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 RRNAD1Q96FB5 475 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LCORQ96JN0 433 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PACRGQ96M98 296 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 WDFY2Q96P53 400 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PNMA5Q96PV4 448 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PAFAH2Q99487 392 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 RTP3Q9BQQ7 232 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 COPS4Q9BT78 406 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TEKT3Q9BXF9 490 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 EPC1Q9H2F5 836 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 UBQLN3Q9H347 655 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 DPEP2Q9H4A9 486 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NXF3Q9H4D5 531 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NOL11Q9H8H0 719 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NMUR1Q9HB89 426 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM248Q9NWD8 314 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GIN1Q9NXP7 522 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CD274Q9NZQ7 290 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 KCMF1Q9P0J7 381 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 EXOGQ9Y2C4 368 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ADAM18Q9Y3Q7 739 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PKP3Q9Y446 797 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PHIPQ8WWQ0 1821 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM82A0PJX8 343 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 DPPA5A6NC42 116 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 A6NL46 340 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 CDRT15L2A8MXV6 281 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 TXNDC9O14530 226 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 CCSO14618 274 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 MID1O15344 667 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 KDELR3O43731 214 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 GLP2RO95838 553 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PIGRP01833 764 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 CLEC2LP0C7M8 214 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 RARAP10276 462 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 IFNGR1P15260 489 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 NME2P22392 152 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 DLSTP36957 453 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 ATP6V0D1P61421 351 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 GRAPQ13588 217 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 STXBP2Q15833 593 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 SNAPC1Q16533 368 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 KIZQ2M2Z5 673 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 AMZ1Q400G9 498 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 LIPJQ5W064 366 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 FOXR1Q6PIV2 292 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 BRAT1Q6PJG6 821 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 Q6ZNX1 250 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC16A12Q6ZSM3 486 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PID1Q7Z2X4 250 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PAQR7Q86WK9 346 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 UBALD2Q8IYN6 164 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 CCDC197Q8NCU1 140 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM185AQ8NFB2 350 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 ACTL9Q8TC94 416 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 FAM172AQ8WUF8 416 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 C22orf15Q8WYQ4 148 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 MAFIPQ8WZ33 124 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 HSD17B8Q92506 261 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 C16orf58Q96GQ5 468 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PGAM5Q96HS1 289 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 RCC1LQ96I51 464 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 SENP8Q96LD8 212 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 RILPQ96NA2 401 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PRRT1Q99946 306 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 C17orf62Q9BQA9 187 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM47Q9BQJ4 181 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 BOCQ9BWV1 1114 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 C1QTNF7Q9BXJ2 289 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 ANO3Q9BYT9 981 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 POLR3FQ9H1D9 316 aaPredicted RBP5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 GANQ9H2C0 597 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PLEKHA2Q9HB19 425 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 GLOD4Q9HC38 313 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 IL23AQ9NPF7 189 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 MYEF2Q9P2K5 600 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 STOML2Q9UJZ1 356 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 CDYLQ9Y232 598 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC5A6Q9Y289 635 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 PRELID3BQ9Y3B1 194 aa5.82□□□□□ -1.48
SMARCE1-208ENST00000474246 SMIM23A6NLE4 172 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms